Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm14878-201ENSMUST00000118167 293 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm14392-201ENSMUST00000120332 401 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm12087-201ENSMUST00000121878 258 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm16331-201ENSMUST00000144274 498 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm23513-201ENSMUST00000158181 133 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm23583-201ENSMUST00000158533 289 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm20674-201ENSMUST00000177452 369 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm27905-201ENSMUST00000184005 207 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm8392-201ENSMUST00000185647 835 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm8599-201ENSMUST00000193033 457 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm38080-201ENSMUST00000194035 268 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm42566-201ENSMUST00000197120 643 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm9616-201ENSMUST00000221154 781 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm17915-201ENSMUST00000222077 548 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm23423-201ENSMUST00000082782 106 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm26206-201ENSMUST00000082908 110 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sp140Q6NSQ5 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sp140Q6NSQ5 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.4□□□□□ -1.7
Sp140Q6NSQ5 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sp140Q6NSQ5 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
Sp140Q6NSQ5 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm14304-201ENSMUST00000117272 446 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm13627-201ENSMUST00000119700 706 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm12237-201ENSMUST00000120158 470 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm14591-201ENSMUST00000120407 518 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm5287-201ENSMUST00000120666 598 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm2005-201ENSMUST00000120759 542 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm11254-201ENSMUST00000122368 653 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm25706-201ENSMUST00000157828 247 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm22765-201ENSMUST00000158371 128 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm9071-201ENSMUST00000165915 474 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm20415-201ENSMUST00000172877 423 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm25670-201ENSMUST00000178423 107 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm26239-201ENSMUST00000178842 107 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm14527-201ENSMUST00000179300 639 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm24267-201ENSMUST00000179841 107 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm9227-201ENSMUST00000194733 566 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm38008-201ENSMUST00000195333 518 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm45081-201ENSMUST00000206281 572 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm46138-201ENSMUST00000215294 426 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm24292-201ENSMUST00000082888 107 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm23460-201ENSMUST00000083258 109 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Mir215-201ENSMUST00000083628 112 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sp140Q6NSQ5 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.39□□□□□ -1.71
Sp140Q6NSQ5 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms