Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm23614-201ENSMUST00000082598 107 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Gm22364-201ENSMUST00000083097 98 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim28Q62318 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim28Q62318 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim28Q62318 Gm42768-201ENSMUST00000197734 2897 ntBASIC5.22□□□□□ -1.57
Trim28Q62318 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim28Q62318 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm26075-201ENSMUST00000104062 121 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm25765-201ENSMUST00000104100 132 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm14785-201ENSMUST00000120185 539 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm12900-201ENSMUST00000120919 573 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm2182-201ENSMUST00000145243 663 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm22491-201ENSMUST00000157190 102 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm27189-201ENSMUST00000184119 190 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm28625-201ENSMUST00000188309 205 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm37715-201ENSMUST00000193206 235 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm43897-201ENSMUST00000204019 309 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm45192-201ENSMUST00000206749 283 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm6929-201ENSMUST00000210930 468 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm7751-201ENSMUST00000212868 709 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm18113-201ENSMUST00000220630 303 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
Trim28Q62318 AC133517.1-202ENSMUST00000224409 233 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 AC166095.1-203ENSMUST00000224591 233 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 AV026068-237ENSMUST00000226075 572 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm23518-201ENSMUST00000082835 153 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Gm25410-201ENSMUST00000083758 137 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim28Q62318 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.21□□□□□ -1.58
Trim28Q62318 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim28Q62318 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim28Q62318 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim28Q62318 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim28Q62318 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Trim28Q62318 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim28Q62318 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm12683-201ENSMUST00000117528 415 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm14794-201ENSMUST00000118181 192 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm11869-201ENSMUST00000118701 329 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm7071-201ENSMUST00000120458 462 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm16331-201ENSMUST00000144274 498 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm6058-201ENSMUST00000154261 399 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm22841-201ENSMUST00000158443 62 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm23205-201ENSMUST00000158671 103 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm10357-201ENSMUST00000159886 264 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm18522-201ENSMUST00000173947 650 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm25817-201ENSMUST00000177758 121 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm24766-201ENSMUST00000179182 121 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm22252-201ENSMUST00000179316 79 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm10292-201ENSMUST00000183142 581 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Trim28Q62318 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim28Q62318 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm44718-201ENSMUST00000206886 359 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm34779-201ENSMUST00000210036 263 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm18704-201ENSMUST00000219736 446 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm23443-201ENSMUST00000082916 128 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm23097-201ENSMUST00000083448 105 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Mir30e-201ENSMUST00000083475 92 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm23345-201ENSMUST00000083817 150 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.2□□□□□ -1.58
Trim28Q62318 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms