Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Mir499-201ENSMUST00000102357 79 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm25466-201ENSMUST00000103995 132 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm12515-201ENSMUST00000120116 361 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm11321-201ENSMUST00000121257 902 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm23234-201ENSMUST00000157304 134 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm16569-201ENSMUST00000160526 314 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm22254-201ENSMUST00000179186 110 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm37290-201ENSMUST00000195775 339 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm6841-201ENSMUST00000220602 598 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm7204-201ENSMUST00000062591 600 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Mir21a-201ENSMUST00000083521 92 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6d-4Q5R1I0 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
Trav6d-4Q5R1I0 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm15231-201ENSMUST00000119174 447 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm11890-201ENSMUST00000119585 417 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm23229-201ENSMUST00000157297 105 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm22141-201ENSMUST00000157403 277 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm22538-201ENSMUST00000158169 299 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm23268-201ENSMUST00000175494 78 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm21893-201ENSMUST00000179119 397 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm28803-201ENSMUST00000190385 764 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm7182-201ENSMUST00000193351 732 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm44399-201ENSMUST00000205043 226 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm6842-201ENSMUST00000211361 390 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm23738-201ENSMUST00000082828 171 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm25099-201ENSMUST00000093716 116 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.4□□□□□ -2.03
Trav6d-4Q5R1I0 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm24958-201ENSMUST00000158009 97 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm23583-201ENSMUST00000158533 289 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm27796-201ENSMUST00000183863 261 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm27427-201ENSMUST00000185134 193 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm1833-201ENSMUST00000191608 682 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm43704-201ENSMUST00000196164 496 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm43992-201ENSMUST00000204358 197 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm46233-201ENSMUST00000217831 449 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav6d-4Q5R1I0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms