Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.63□□□□□ -1.67
Ccdc88bQ4QRL3 Gm14593-201ENSMUST00000119948 294 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm13751-201ENSMUST00000120280 752 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm8880-201ENSMUST00000121800 454 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm14402-201ENSMUST00000122217 508 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm1833-201ENSMUST00000191608 682 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm44030-201ENSMUST00000204865 432 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm18000-201ENSMUST00000212153 800 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Gm10343-201ENSMUST00000096279 348 ntBASIC4.62□□□□□ -1.67
Ccdc88bQ4QRL3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm11905-201ENSMUST00000117653 678 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm16584-201ENSMUST00000159267 189 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm29148-201ENSMUST00000188140 336 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm38356-201ENSMUST00000194313 408 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm43384-201ENSMUST00000200569 637 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm9377-201ENSMUST00000207227 623 ntBASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Gm14142-201ENSMUST00000117833 296 ntBASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Gm14506-201ENSMUST00000121165 536 ntBASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm24291-201ENSMUST00000157633 162 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm25863-201ENSMUST00000158249 329 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm17091-201ENSMUST00000163248 357 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Mir6386-201ENSMUST00000183558 104 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Mir7242-201ENSMUST00000183710 79 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm25636-201ENSMUST00000082666 133 ntBASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88bQ4QRL3 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Ccdc88bQ4QRL3 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Gm23902-201ENSMUST00000157571 134 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Mir7013-201ENSMUST00000183540 72 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Gm27959-201ENSMUST00000185172 111 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ccdc88bQ4QRL3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm24907-201ENSMUST00000116932 128 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm38076-201ENSMUST00000193889 450 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm26494-201ENSMUST00000083154 143 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm24493-201ENSMUST00000083805 143 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ccdc88bQ4QRL3 Gm22961-201ENSMUST00000157964 106 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Snora23-201ENSMUST00000082517 184 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms