Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm29534-201ENSMUST00000187328 382 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm37085-201ENSMUST00000193780 196 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm26121-201ENSMUST00000083364 162 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm12149-201ENSMUST00000117511 654 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm12739-201ENSMUST00000119769 382 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm15190-201ENSMUST00000120855 276 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm15244-201ENSMUST00000121122 130 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm15530-201ENSMUST00000122206 555 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm14903-201ENSMUST00000122435 537 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm27893-201ENSMUST00000184408 194 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm29104-201ENSMUST00000186304 222 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm18505-201ENSMUST00000187360 790 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm37828-201ENSMUST00000192496 432 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm37431-201ENSMUST00000195102 111 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm9818-201ENSMUST00000050900 255 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm9845-201ENSMUST00000056409 598 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm22979-201ENSMUST00000082609 159 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm22043-201ENSMUST00000082993 158 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.38□□□□□ -1.87
Upf3bQ3ULL6 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm22115-201ENSMUST00000103976 133 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm23923-201ENSMUST00000104108 133 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm15157-201ENSMUST00000121852 702 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm4761-201ENSMUST00000178086 582 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Mir8096-201ENSMUST00000184526 127 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm27308-201ENSMUST00000184807 233 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm43345-201ENSMUST00000199484 269 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm17917-201ENSMUST00000218561 953 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm22739-201ENSMUST00000083437 160 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Upf3bQ3ULL6 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 BC051076-202ENSMUST00000199477 2868 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm24119-201ENSMUST00000103979 246 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm12392-201ENSMUST00000118014 938 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm16373-201ENSMUST00000129517 303 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms