Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Mir6938-201ENSMUST00000184173 63 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm27428-201ENSMUST00000184289 110 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm38075-201ENSMUST00000191979 920 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm42924-201ENSMUST00000197261 185 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm44465-201ENSMUST00000199536 114 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm44989-201ENSMUST00000204749 217 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm45031-201ENSMUST00000206800 288 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm45499-201ENSMUST00000211656 280 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm26176-201ENSMUST00000083795 105 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm13478-201ENSMUST00000118312 413 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm11843-201ENSMUST00000118984 425 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm6587-201ENSMUST00000120219 613 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm8200-201ENSMUST00000122390 222 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm24961-201ENSMUST00000157918 184 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm22434-201ENSMUST00000158549 122 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm27313-201ENSMUST00000183500 142 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm38019-201ENSMUST00000195133 380 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm5876-201ENSMUST00000203735 243 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm26107-201ENSMUST00000083972 107 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col28a1Q2UY11 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Gm15076-201ENSMUST00000117076 474 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Gm12427-201ENSMUST00000117719 302 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Gm15180-201ENSMUST00000117745 492 ntBASIC4.03□□□□□ -1.76
Col28a1Q2UY11 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms