Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm26082-201ENSMUST00000104070 127 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm12432-201ENSMUST00000119540 186 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm24394-201ENSMUST00000158141 123 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm22192-201ENSMUST00000175128 85 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm18433-202ENSMUST00000195682 196 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm5552-201ENSMUST00000197149 515 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm25632-201ENSMUST00000083112 85 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm14421-201ENSMUST00000121755 1958 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm8935-201ENSMUST00000066794 2798 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm14939-201ENSMUST00000120347 680 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm14848-201ENSMUST00000121850 467 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm26029-201ENSMUST00000158659 132 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Mir3471-2-201ENSMUST00000174896 102 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm29657-201ENSMUST00000189807 342 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm43845-201ENSMUST00000202462 1820 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm15074-201ENSMUST00000117603 936 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm19224-201ENSMUST00000190477 793 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Trbv27-201ENSMUST00000193711 277 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm18388-201ENSMUST00000222339 557 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 CT573085.1-201ENSMUST00000224279 1197 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 AC130536.1-201ENSMUST00000224425 271 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm6923-201ENSMUST00000118343 406 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm24858-201ENSMUST00000158058 323 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm22257-201ENSMUST00000158687 301 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm6649-201ENSMUST00000199743 1165 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm43746-201ENSMUST00000200028 317 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm44220-201ENSMUST00000203784 2487 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm26080-201ENSMUST00000104069 131 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm15377-201ENSMUST00000119594 246 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm14649-201ENSMUST00000121814 324 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm24720-201ENSMUST00000157518 166 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm25048-201ENSMUST00000158598 91 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm8282-201ENSMUST00000187559 483 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm45654-201ENSMUST00000210980 123 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm25402-201ENSMUST00000082966 131 ntBASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ush2AQ2QI47 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 AC154552.6-201ENSMUST00000221365 1342 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm14125-201ENSMUST00000113442 680 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm7984-201ENSMUST00000060640 538 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 n-R5s182-201ENSMUST00000083889 107 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm8744-201ENSMUST00000204475 3581 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm22532-201ENSMUST00000158822 140 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm16101-201ENSMUST00000160695 430 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm5058-201ENSMUST00000187331 463 ntBASIC1.48□□□□□ -2.17
Ush2AQ2QI47 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ush2AQ2QI47 Gm23264-201ENSMUST00000083372 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms