Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm25630-201ENSMUST00000084000 162 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm37674-201ENSMUST00000194177 1834 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Col17a1Q07563 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm13865-201ENSMUST00000120957 865 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm23034-201ENSMUST00000158001 147 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm25373-201ENSMUST00000158156 115 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm23198-201ENSMUST00000158811 91 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm23379-201ENSMUST00000180026 107 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm25120-201ENSMUST00000180148 79 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm8106-201ENSMUST00000213123 523 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col17a1Q07563 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm23615-201ENSMUST00000082602 65 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col17a1Q07563 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.1□□□□□ -1.43
Col17a1Q07563 Gm650-201ENSMUST00000144428 1551 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm14793-201ENSMUST00000118739 311 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm14861-201ENSMUST00000119451 455 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm26020-201ENSMUST00000122729 183 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm24002-201ENSMUST00000158456 104 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm18522-201ENSMUST00000173947 650 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm44370-201ENSMUST00000175436 112 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm25397-201ENSMUST00000176951 92 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm27539-201ENSMUST00000184971 224 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm43355-201ENSMUST00000196541 346 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm44409-201ENSMUST00000198810 166 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm45269-201ENSMUST00000210359 282 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm2710-201ENSMUST00000073196 603 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Col17a1Q07563 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col17a1Q07563 AC152162.1-201ENSMUST00000225910 2917 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm38286-201ENSMUST00000195128 3105 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col17a1Q07563 AC160931.3-201ENSMUST00000222111 2267 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col17a1Q07563 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.09□□□□□ -1.43
Col17a1Q07563 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col17a1Q07563 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm14788-201ENSMUST00000119457 375 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm11797-201ENSMUST00000121336 754 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm22101-201ENSMUST00000157928 103 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm17919-201ENSMUST00000173344 312 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm29335-201ENSMUST00000188361 459 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm44274-201ENSMUST00000203417 256 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 AC161256.1-201ENSMUST00000217312 213 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm24707-201ENSMUST00000082812 107 ntBASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col17a1Q07563 Gm14806-201ENSMUST00000116606 2110 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Col17a1Q07563 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm6893-201ENSMUST00000118385 522 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm13785-201ENSMUST00000119099 690 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm12617-201ENSMUST00000121268 381 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm22958-201ENSMUST00000122512 184 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm23897-201ENSMUST00000158110 158 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col17a1Q07563 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm27599-201ENSMUST00000183758 174 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm19694-201ENSMUST00000192364 505 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Trbv8-201ENSMUST00000194020 285 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm44665-201ENSMUST00000205381 251 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Gm44623-201ENSMUST00000207934 434 ntBASIC6.08□□□□□ -1.44
Col17a1Q07563 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col17a1Q07563 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms