Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col9a1Q05722 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Mir690-201ENSMUST00000102110 109 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Mir466p-201ENSMUST00000103925 89 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm24403-201ENSMUST00000104616 130 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm12550-201ENSMUST00000118478 329 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm9003-201ENSMUST00000121810 482 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm24441-201ENSMUST00000157235 281 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm24745-201ENSMUST00000157840 85 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm18520-201ENSMUST00000174783 658 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm20651-201ENSMUST00000177219 329 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Mir7012-201ENSMUST00000183900 64 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm37693-201ENSMUST00000194562 234 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm9402-201ENSMUST00000196849 388 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm33952-201ENSMUST00000197795 408 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm23722-201ENSMUST00000083002 130 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.88□□□□□ -1.47
Col9a1Q05722 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Col9a1Q05722 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col9a1Q05722 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col9a1Q05722 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm13604-201ENSMUST00000119332 482 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm13818-201ENSMUST00000119441 511 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm23640-201ENSMUST00000157860 104 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm22212-201ENSMUST00000158096 106 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col9a1Q05722 Mir323-201ENSMUST00000083683 86 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.87□□□□□ -1.47
Col9a1Q05722 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col9a1Q05722 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col9a1Q05722 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm12640-201ENSMUST00000120097 310 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm22027-201ENSMUST00000122737 127 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm25054-201ENSMUST00000157370 97 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm22122-201ENSMUST00000175147 200 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm32158-201ENSMUST00000200135 404 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm45013-201ENSMUST00000206883 178 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm44871-201ENSMUST00000207821 497 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm23737-201ENSMUST00000082547 159 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.86□□□□□ -1.47
Col9a1Q05722 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms