Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm2645-201ENSMUST00000223516 547 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Snord22-201ENSMUST00000083153 126 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm24544-201ENSMUST00000103862 110 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm14517-201ENSMUST00000119040 337 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm12787-201ENSMUST00000119234 396 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm13932-201ENSMUST00000120873 610 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm5963-201ENSMUST00000143451 236 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm6632-201ENSMUST00000168425 954 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm23793-201ENSMUST00000179396 117 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm36954-201ENSMUST00000195362 363 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm19202-201ENSMUST00000198096 808 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm18507-201ENSMUST00000218855 525 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Col6a1Q04857 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a1Q04857 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Col6a1Q04857 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm23014-201ENSMUST00000104144 130 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm23594-201ENSMUST00000104307 134 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm14771-201ENSMUST00000118249 203 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm13232-201ENSMUST00000121816 632 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm23214-201ENSMUST00000122716 157 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm24175-201ENSMUST00000158931 129 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Mir6382-201ENSMUST00000184055 110 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm28283-201ENSMUST00000185509 178 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm43405-201ENSMUST00000198642 337 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm18482-201ENSMUST00000202405 760 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm44011-201ENSMUST00000203336 394 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a1Q04857 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 AC134860.6-201ENSMUST00000226038 285 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm26439-201ENSMUST00000082592 106 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm6043-201ENSMUST00000099961 492 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms