Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm44336-201ENSMUST00000203696 468 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Gm45395-201ENSMUST00000209891 559 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.79□□□□□ -1.64
Msx2Q03358 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.79□□□□□ -1.64
Msx2Q03358 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Gm19326-201ENSMUST00000219818 326 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.79□□□□□ -1.64
Msx2Q03358 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Gm5045-201ENSMUST00000027054 810 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msx2Q03358 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msx2Q03358 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Mir298-201ENSMUST00000083476 82 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.79□□□□□ -1.64
Msx2Q03358 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msx2Q03358 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.79□□□□□ -1.64
Msx2Q03358 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msx2Q03358 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Msx2Q03358 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm11975-201ENSMUST00000118772 481 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm11196-201ENSMUST00000119052 395 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm14977-201ENSMUST00000121626 812 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm12087-201ENSMUST00000121878 258 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm5401-201ENSMUST00000122444 365 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm22843-201ENSMUST00000157710 134 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm24584-201ENSMUST00000157972 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm25520-201ENSMUST00000158389 118 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Mir3112-201ENSMUST00000175431 82 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm27854-201ENSMUST00000175578 244 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm22286-201ENSMUST00000179708 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Mir6417-201ENSMUST00000183815 116 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm28389-201ENSMUST00000190090 697 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm20770-201ENSMUST00000193474 694 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm9442-201ENSMUST00000194242 319 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm43456-201ENSMUST00000202519 457 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm8132-201ENSMUST00000204938 640 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm32536-201ENSMUST00000205209 445 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm45215-201ENSMUST00000206407 395 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm5955-201ENSMUST00000222712 219 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm22749-201ENSMUST00000082490 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm24856-201ENSMUST00000082809 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm24316-201ENSMUST00000083041 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm25258-201ENSMUST00000083049 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm24535-201ENSMUST00000083140 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Mir342-201ENSMUST00000083502 99 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Mir449a-201ENSMUST00000083641 91 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm22352-201ENSMUST00000083917 107 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Msx2Q03358 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msx2Q03358 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msx2Q03358 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.78□□□□□ -1.64
Msx2Q03358 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.78□□□□□ -1.65
Msx2Q03358 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx2Q03358 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Msx2Q03358 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Msx2Q03358 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Msx2Q03358 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm13491-201ENSMUST00000118267 235 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm12771-201ENSMUST00000120246 135 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm22345-201ENSMUST00000122644 107 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm23965-201ENSMUST00000157969 142 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm17109-201ENSMUST00000163985 358 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm24618-201ENSMUST00000177718 94 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm23953-201ENSMUST00000178214 94 ntBASIC4.77□□□□□ -1.65
Msx2Q03358 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Msx2Q03358 Gm26332-201ENSMUST00000179813 94 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms