Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.86□□□□□ -1.95
HttP42859 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HttP42859 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.85□□□□□ -1.95
HttP42859 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HttP42859 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HttP42859 Mir676-201ENSMUST00000102443 89 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm24317-201ENSMUST00000178536 107 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.85□□□□□ -1.95
HttP42859 Mrgprb13-201ENSMUST00000188191 985 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm21006-201ENSMUST00000196930 667 ntBASIC2.85□□□□□ -1.95
HttP42859 Mir497-201ENSMUST00000200557 84 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm17890-201ENSMUST00000221419 757 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.85□□□□□ -1.95
HttP42859 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HttP42859 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HttP42859 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
HttP42859 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm23010-201ENSMUST00000104151 126 ntBASIC2.85□□□□□ -1.95
HttP42859 Gm14578-201ENSMUST00000122166 391 ntBASIC2.85□□□□□ -1.95
HttP42859 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HttP42859 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
HttP42859 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HttP42859 Gm25094-201ENSMUST00000103992 131 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm15074-201ENSMUST00000117603 936 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.84□□□□□ -1.95
HttP42859 Gm43587-201ENSMUST00000199590 204 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm43440-201ENSMUST00000201957 729 ntBASIC2.84□□□□□ -1.95
HttP42859 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HttP42859 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.84□□□□□ -1.95
HttP42859 AC140397.1-201ENSMUST00000225563 4562 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm12871-201ENSMUST00000118758 438 ntBASIC2.84□□□□□ -1.95
HttP42859 Gm37111-201ENSMUST00000193250 634 ntBASIC2.84□□□□□ -1.95
HttP42859 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HttP42859 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC2.84□□□□□ -1.96
HttP42859 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HttP42859 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.84□□□□□ -1.96
HttP42859 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HttP42859 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.84□□□□□ -1.96
HttP42859 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.84□□□□□ -1.96
HttP42859 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.84□□□□□ -1.96
HttP42859 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.84□□□□□ -1.96
HttP42859 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HttP42859 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HttP42859 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HttP42859 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HttP42859 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HttP42859 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
HttP42859 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HttP42859 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm6444-201ENSMUST00000119611 458 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm26004-201ENSMUST00000158804 116 ntBASIC2.83□□□□□ -1.96
HttP42859 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
HttP42859 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
HttP42859 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.83□□□□□ -1.96
HttP42859 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HttP42859 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.83□□□□□ -1.96
HttP42859 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HttP42859 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.83□□□□□ -1.96
HttP42859 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HttP42859 Gm28628-201ENSMUST00000187006 264 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm28629-201ENSMUST00000187309 263 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm44712-201ENSMUST00000206250 1076 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.83□□□□□ -1.96
HttP42859 Gm7530-201ENSMUST00000218466 605 ntBASIC2.83□□□□□ -1.96
HttP42859 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.83□□□□□ -1.96
HttP42859 Gm19154-201ENSMUST00000223330 940 ntBASIC2.83□□□□□ -1.96
HttP42859 Mir21a-201ENSMUST00000083521 92 ntBASIC2.83□□□□□ -1.96
HttP42859 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC2.83□□□□□ -1.96
HttP42859 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HttP42859 AC192333.5-201ENSMUST00000224620 2350 ntBASIC2.83□□□□□ -1.96
HttP42859 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HttP42859 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
HttP42859 Gm24715-201ENSMUST00000102377 95 ntBASIC2.82□□□□□ -1.96
HttP42859 Gm14977-201ENSMUST00000121626 812 ntBASIC2.82□□□□□ -1.96
HttP42859 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.82□□□□□ -1.96
HttP42859 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HttP42859 Gm38166-201ENSMUST00000191660 471 ntBASIC2.82□□□□□ -1.96
HttP42859 Gm6649-201ENSMUST00000199743 1165 ntBASIC2.82□□□□□ -1.96
HttP42859 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.82□□□□□ -1.96
HttP42859 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HttP42859 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC2.82□□□□□ -1.96
HttP42859 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HttP42859 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HttP42859 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.82□□□□□ -1.96
HttP42859 Gm43717-201ENSMUST00000198684 310 ntBASIC2.82□□□□□ -1.96
HttP42859 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.82□□□□□ -1.96
HttP42859 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HttP42859 Gm43024-201ENSMUST00000196770 4352 ntBASIC2.82□□□□□ -1.96
HttP42859 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HttP42859 Gm13788-201ENSMUST00000120767 601 ntBASIC2.82□□□□□ -1.96
HttP42859 Gm25048-201ENSMUST00000158598 91 ntBASIC2.82□□□□□ -1.96
HttP42859 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HttP42859 AC155921.1-201ENSMUST00000216568 3841 ntBASIC2.82□□□□□ -1.96
HttP42859 AC154618.1-201ENSMUST00000227451 303 ntBASIC2.82□□□□□ -1.96
HttP42859 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HttP42859 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HttP42859 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HttP42859 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms