Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig1P37913 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Lig1P37913 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig1P37913 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lig1P37913 Gm25213-201ENSMUST00000102388 113 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Gm12935-201ENSMUST00000119352 246 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lig1P37913 Gm12755-201ENSMUST00000122297 282 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.82□□□□□ -1.64
Lig1P37913 Gm17109-201ENSMUST00000163985 358 ntBASIC4.82□□□□□ -1.64
Lig1P37913 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Mir6996-201ENSMUST00000183922 61 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm27957-201ENSMUST00000184054 127 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm28661-201ENSMUST00000188231 681 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm19694-201ENSMUST00000192364 505 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm37300-201ENSMUST00000193327 280 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Mir129b-201ENSMUST00000197461 65 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Gm7495-201ENSMUST00000215099 426 ntBASIC4.82□□□□□ -1.64
Lig1P37913 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.82□□□□□ -1.64
Lig1P37913 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Gm18113-201ENSMUST00000220630 303 ntBASIC4.82□□□□□ -1.64
Lig1P37913 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.82□□□□□ -1.64
Lig1P37913 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.82□□□□□ -1.64
Lig1P37913 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.82□□□□□ -1.64
Lig1P37913 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lig1P37913 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lig1P37913 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lig1P37913 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Lig1P37913 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig1P37913 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig1P37913 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig1P37913 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Lig1P37913 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm24792-201ENSMUST00000104286 128 ntBASIC4.81□□□□□ -1.64
Lig1P37913 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm5757-201ENSMUST00000117494 528 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm11352-201ENSMUST00000119264 517 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm22968-201ENSMUST00000157955 118 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm24850-201ENSMUST00000158029 119 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm22836-201ENSMUST00000158441 61 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm3030-201ENSMUST00000163410 516 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lig1P37913 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm8151-201ENSMUST00000184817 871 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm8296-201ENSMUST00000185597 524 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm28596-201ENSMUST00000185870 696 ntBASIC4.81□□□□□ -1.64
Lig1P37913 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lig1P37913 Gm32295-201ENSMUST00000192558 696 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm31260-201ENSMUST00000193478 696 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm37418-201ENSMUST00000195031 274 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm42566-201ENSMUST00000197120 643 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm43007-201ENSMUST00000197618 291 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.81□□□□□ -1.64
Lig1P37913 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.81□□□□□ -1.64
Lig1P37913 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lig1P37913 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Lig1P37913 Gm22829-201ENSMUST00000083771 106 ntBASIC4.81□□□□□ -1.64
Lig1P37913 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lig1P37913 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 Gm3940-201ENSMUST00000105087 432 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm12268-201ENSMUST00000118398 442 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm14861-201ENSMUST00000119451 455 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm11512-201ENSMUST00000119669 663 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm7916-201ENSMUST00000120325 456 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm22080-201ENSMUST00000157591 106 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm23499-201ENSMUST00000157736 268 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm22156-201ENSMUST00000158409 141 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.8□□□□□ -1.64
Lig1P37913 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.8□□□□□ -1.64
Lig1P37913 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Mir6345-201ENSMUST00000184286 128 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms