Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm25047-201ENSMUST00000122667 104 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm23467-201ENSMUST00000157127 159 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm26371-201ENSMUST00000157829 104 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Mir7009-201ENSMUST00000184519 64 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm28745-201ENSMUST00000190069 305 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm43478-201ENSMUST00000200381 292 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm44656-201ENSMUST00000208428 490 ntBASIC3.36□□□□□ -1.87
Col2a1P28481 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col2a1P28481 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col2a1P28481 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm14518-201ENSMUST00000117351 542 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm12731-201ENSMUST00000120932 268 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm14578-201ENSMUST00000122166 391 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm38018-201ENSMUST00000195651 540 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.35□□□□□ -1.87
Col2a1P28481 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col2a1P28481 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm22971-201ENSMUST00000083305 97 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col2a1P28481 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm11866-201ENSMUST00000120209 335 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm23325-201ENSMUST00000157422 129 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm23897-201ENSMUST00000158110 158 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm25707-201ENSMUST00000175120 96 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 Gm34314-201ENSMUST00000203622 367 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.35□□□□□ -1.87
Col2a1P28481 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.35□□□□□ -1.87
Col2a1P28481 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.35□□□□□ -1.87
Col2a1P28481 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col2a1P28481 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col2a1P28481 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Col2a1P28481 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.34□□□□□ -1.87
Col2a1P28481 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
Col2a1P28481 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col2a1P28481 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col2a1P28481 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col2a1P28481 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Mir499-201ENSMUST00000102357 79 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Col2a1P28481 Gm16218-201ENSMUST00000155424 388 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm24691-201ENSMUST00000157762 140 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Trbv10-201ENSMUST00000168322 289 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm25360-201ENSMUST00000178786 191 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm7258-201ENSMUST00000179317 300 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm8242-202ENSMUST00000193056 475 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm29815-201ENSMUST00000202418 178 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm44137-201ENSMUST00000203670 367 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm24446-201ENSMUST00000083982 156 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Gm10780-201ENSMUST00000099459 285 ntBASIC3.34□□□□□ -1.88
Col2a1P28481 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col2a1P28481 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Col2a1P28481 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col2a1P28481 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col2a1P28481 Gm13717-201ENSMUST00000119868 365 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Gm22600-201ENSMUST00000157598 269 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Gm24111-201ENSMUST00000175491 97 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Mir5118-201ENSMUST00000175551 67 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms