Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.11□□□□□ -1.91
P20040 Gm20673-201ENSMUST00000177167 430 ntBASIC3.11□□□□□ -1.91
P20040 Gm22908-201ENSMUST00000177620 110 ntBASIC3.11□□□□□ -1.91
P20040 Gm22776-201ENSMUST00000178634 94 ntBASIC3.11□□□□□ -1.91
P20040 Gm23767-201ENSMUST00000179278 94 ntBASIC3.11□□□□□ -1.91
P20040 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
P20040 Gm27308-201ENSMUST00000184807 233 ntBASIC3.11□□□□□ -1.91
P20040 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
P20040 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.11□□□□□ -1.91
P20040 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.11□□□□□ -1.91
P20040 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
P20040 Gm20811-201ENSMUST00000190500 553 ntBASIC3.11□□□□□ -1.91
P20040 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.11□□□□□ -1.91
P20040 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.11□□□□□ -1.91
P20040 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.11□□□□□ -1.91
P20040 Gm45778-201ENSMUST00000211959 153 ntBASIC3.11□□□□□ -1.91
P20040 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.11□□□□□ -1.91
P20040 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.11□□□□□ -1.91
P20040 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.11□□□□□ -1.91
P20040 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.11□□□□□ -1.91
P20040 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.11□□□□□ -1.91
P20040 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
P20040 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
P20040 Snord15a-201ENSMUST00000083888 148 ntBASIC3.11□□□□□ -1.91
P20040 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.11□□□□□ -1.91
P20040 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.11□□□□□ -1.91
P20040 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
P20040 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
P20040 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
P20040 Gm12090-201ENSMUST00000118692 758 ntBASIC3.1□□□□□ -1.91
P20040 Gm16363-201ENSMUST00000132460 877 ntBASIC3.1□□□□□ -1.91
P20040 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
P20040 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.1□□□□□ -1.91
P20040 Gm24960-201ENSMUST00000157923 90 ntBASIC3.1□□□□□ -1.91
P20040 Gm25369-201ENSMUST00000158848 132 ntBASIC3.1□□□□□ -1.91
P20040 Gm20399-201ENSMUST00000174652 132 ntBASIC3.1□□□□□ -1.91
P20040 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.1□□□□□ -1.91
P20040 Gm22108-201ENSMUST00000177961 106 ntBASIC3.1□□□□□ -1.91
P20040 Spin2g-201ENSMUST00000178425 687 ntBASIC3.1□□□□□ -1.91
P20040 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
P20040 Gm24798-201ENSMUST00000179334 106 ntBASIC3.1□□□□□ -1.91
P20040 Gm27522-201ENSMUST00000183949 230 ntBASIC3.1□□□□□ -1.91
P20040 Gm27648-201ENSMUST00000184315 107 ntBASIC3.1□□□□□ -1.91
P20040 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.1□□□□□ -1.91
P20040 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
P20040 Gm37002-201ENSMUST00000194560 373 ntBASIC3.1□□□□□ -1.91
P20040 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.1□□□□□ -1.91
P20040 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.1□□□□□ -1.91
P20040 Gm43405-201ENSMUST00000198642 337 ntBASIC3.1□□□□□ -1.91
P20040 Gm42926-201ENSMUST00000200496 697 ntBASIC3.1□□□□□ -1.91
P20040 Gm43415-201ENSMUST00000201934 750 ntBASIC3.1□□□□□ -1.91
P20040 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.1□□□□□ -1.91
P20040 Gm44016-201ENSMUST00000203463 164 ntBASIC3.1□□□□□ -1.91
P20040 Gm19253-201ENSMUST00000204279 307 ntBASIC3.1□□□□□ -1.91
P20040 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
P20040 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
P20040 Gm45814-201ENSMUST00000212646 775 ntBASIC3.1□□□□□ -1.91
P20040 Gm8681-201ENSMUST00000219115 618 ntBASIC3.1□□□□□ -1.91
P20040 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.1□□□□□ -1.91
P20040 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.1□□□□□ -1.91
P20040 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.1□□□□□ -1.91
P20040 Gm26439-201ENSMUST00000082592 106 ntBASIC3.1□□□□□ -1.91
P20040 Gm25480-201ENSMUST00000083217 133 ntBASIC3.1□□□□□ -1.91
P20040 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.1□□□□□ -1.91
P20040 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
P20040 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.1□□□□□ -1.91
P20040 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
P20040 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.09□□□□□ -1.91
P20040 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
P20040 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P20040 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.09□□□□□ -1.91
P20040 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P20040 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
P20040 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
P20040 Gm25560-201ENSMUST00000104606 176 ntBASIC3.09□□□□□ -1.91
P20040 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
P20040 Gm24831-201ENSMUST00000116778 126 ntBASIC3.09□□□□□ -1.91
P20040 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.09□□□□□ -1.91
P20040 Gm11869-201ENSMUST00000118701 329 ntBASIC3.09□□□□□ -1.91
P20040 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.09□□□□□ -1.91
P20040 Gm15014-201ENSMUST00000120742 258 ntBASIC3.09□□□□□ -1.91
P20040 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.09□□□□□ -1.91
P20040 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.09□□□□□ -1.91
P20040 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P20040 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
P20040 Gm22310-201ENSMUST00000157509 116 ntBASIC3.09□□□□□ -1.91
P20040 Gm3025-201ENSMUST00000163454 489 ntBASIC3.09□□□□□ -1.91
P20040 Gm2878-201ENSMUST00000170173 486 ntBASIC3.09□□□□□ -1.91
P20040 Gm27903-201ENSMUST00000175482 126 ntBASIC3.09□□□□□ -1.91
P20040 Mir6914-201ENSMUST00000184999 69 ntBASIC3.09□□□□□ -1.91
P20040 Gm20776-201ENSMUST00000189940 700 ntBASIC3.09□□□□□ -1.91
P20040 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.09□□□□□ -1.91
P20040 Gm19243-201ENSMUST00000198592 269 ntBASIC3.09□□□□□ -1.91
P20040 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.09□□□□□ -1.91
P20040 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms