Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm8942-201ENSMUST00000217892 400 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm35405-201ENSMUST00000218754 400 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.83□□□□□ -1.96
Sdc1P18828 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.83□□□□□ -1.96
Sdc1P18828 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Sdc1P18828 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Sdc1P18828 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc1P18828 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.83□□□□□ -1.96
Sdc1P18828 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm649-201ENSMUST00000117284 1054 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm11372-201ENSMUST00000117348 570 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm12998-201ENSMUST00000122445 789 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm22960-201ENSMUST00000122517 104 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm25436-201ENSMUST00000158275 145 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm22766-201ENSMUST00000158372 99 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Scarna6-201ENSMUST00000158656 265 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc1P18828 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 S100a11-ps-201ENSMUST00000181735 306 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm27999-201ENSMUST00000183539 193 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm23925-202ENSMUST00000188429 132 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc1P18828 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm37523-201ENSMUST00000194901 412 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm7751-201ENSMUST00000212868 709 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Sdc1P18828 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm22043-201ENSMUST00000082993 158 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Mir133a-2-201ENSMUST00000083526 104 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm7676-201ENSMUST00000084055 319 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Sdc1P18828 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc1P18828 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.82□□□□□ -1.96
Sdc1P18828 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Sdc1P18828 Gm25313-201ENSMUST00000101817 116 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm16128-201ENSMUST00000117855 626 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm13167-201ENSMUST00000118554 578 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm11869-201ENSMUST00000118701 329 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm13430-201ENSMUST00000121366 288 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm4725-201ENSMUST00000151048 587 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Sdc1P18828 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Sdc1P18828 Mir5103-201ENSMUST00000175111 79 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Mir3112-201ENSMUST00000175431 82 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm23287-201ENSMUST00000179427 116 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm23143-201ENSMUST00000180137 116 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm37428-201ENSMUST00000193886 137 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC2.81□□□□□ -1.96
Sdc1P18828 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Sdc1P18828 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.81□□□□□ -1.96
Sdc1P18828 CT025689.2-201ENSMUST00000224979 429 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Sdc1P18828 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
Sdc1P18828 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Sdc1P18828 Gm24871-201ENSMUST00000083099 116 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm23452-201ENSMUST00000083327 107 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Snord15a-201ENSMUST00000083888 148 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.81□□□□□ -1.96
Sdc1P18828 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Sdc1P18828 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Sdc1P18828 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Sdc1P18828 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms