Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm14981-201ENSMUST00000117325 943 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm11566-201ENSMUST00000118550 203 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm15313-201ENSMUST00000119179 282 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm14570-201ENSMUST00000119444 391 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm11414-201ENSMUST00000121795 263 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm14473-201ENSMUST00000122269 557 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm22135-201ENSMUST00000158752 108 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm7241-201ENSMUST00000159853 357 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm17155-201ENSMUST00000165969 473 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm17655-201ENSMUST00000167969 255 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm19641-201ENSMUST00000188432 417 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm37495-201ENSMUST00000194590 264 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm43649-201ENSMUST00000196596 391 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm45778-201ENSMUST00000211959 153 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm45742-201ENSMUST00000212400 433 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Cdx1P18111 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Gm7099-201ENSMUST00000080066 554 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Gm22293-201ENSMUST00000083314 109 ntBASIC2.97□□□□□ -1.93
Cdx1P18111 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Cdx1P18111 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Cdx1P18111 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Cdx1P18111 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm25833-201ENSMUST00000104137 133 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm24671-201ENSMUST00000104159 158 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm25728-201ENSMUST00000104525 159 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm14282-201ENSMUST00000119484 240 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm6071-201ENSMUST00000119561 440 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm16017-201ENSMUST00000119834 208 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm22792-201ENSMUST00000157225 133 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm22885-201ENSMUST00000157410 107 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm24505-201ENSMUST00000157682 126 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm23112-201ENSMUST00000158606 125 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm7346-201ENSMUST00000169661 476 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm27033-201ENSMUST00000183226 544 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm27648-201ENSMUST00000184315 107 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm5829-201ENSMUST00000191383 351 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm37791-201ENSMUST00000195081 286 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm18384-201ENSMUST00000195974 808 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm35702-201ENSMUST00000198653 511 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm42453-201ENSMUST00000200477 409 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm45796-201ENSMUST00000212483 114 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm18039-201ENSMUST00000217816 728 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.96□□□□□ -1.94
Cdx1P18111 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.96□□□□□ -1.94
Cdx1P18111 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Cdx1P18111 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Cdx1P18111 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.96□□□□□ -1.94
Cdx1P18111 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Cdx1P18111 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Cdx1P18111 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Cdx1P18111 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Cdx1P18111 Gm24890-201ENSMUST00000104389 102 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm24318-201ENSMUST00000104490 131 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm15151-201ENSMUST00000117106 177 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm13650-201ENSMUST00000117729 433 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm15988-201ENSMUST00000118677 367 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm12858-201ENSMUST00000121913 208 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm23886-201ENSMUST00000122684 313 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC2.95□□□□□ -1.94
Cdx1P18111 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.95□□□□□ -1.94
Cdx1P18111 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm3370-201ENSMUST00000171785 500 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
Cdx1P18111 Gm27698-201ENSMUST00000184060 249 ntBASIC2.95□□□□□ -1.94
Cdx1P18111 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms