Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm14971-201ENSMUST00000117980 663 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm11866-201ENSMUST00000120209 335 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm14876-201ENSMUST00000120795 327 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm14768-201ENSMUST00000122126 678 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm37807-201ENSMUST00000194310 190 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Gm44092-201ENSMUST00000204470 258 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.27□□□□□ -1.89
Col1a1P11087 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col1a1P11087 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Col1a1P11087 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col1a1P11087 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col1a1P11087 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col1a1P11087 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col1a1P11087 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Gm25529-201ENSMUST00000104850 92 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Gm14897-201ENSMUST00000118213 207 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Gm25642-201ENSMUST00000175137 66 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Col1a1P11087 Gm37293-201ENSMUST00000191658 295 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Gm36985-201ENSMUST00000195595 379 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Mir127-201ENSMUST00000093568 70 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Col1a1P11087 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Col1a1P11087 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.26□□□□□ -1.89
Col1a1P11087 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Col1a1P11087 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Col1a1P11087 Gm14506-201ENSMUST00000121165 536 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.25□□□□□ -1.89
Col1a1P11087 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.25□□□□□ -1.89
Col1a1P11087 Gm8209-201ENSMUST00000206386 553 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 Gm20074-201ENSMUST00000208144 484 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col1a1P11087 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col1a1P11087 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Col1a1P11087 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.25□□□□□ -1.89
Col1a1P11087 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col1a1P11087 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col1a1P11087 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col1a1P11087 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col1a1P11087 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col1a1P11087 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col1a1P11087 Gm24273-201ENSMUST00000102332 164 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm28574-201ENSMUST00000185757 699 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm28871-201ENSMUST00000186191 687 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm28057-201ENSMUST00000186603 615 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm28397-201ENSMUST00000187970 699 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Col1a1P11087 Gm29366-201ENSMUST00000190481 699 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm46996-201ENSMUST00000220924 408 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm18026-201ENSMUST00000222789 727 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 LOC667541-201ENSMUST00000223408 278 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Gm24698-201ENSMUST00000083883 130 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col1a1P11087 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.24□□□□□ -1.89
Col1a1P11087 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.24□□□□□ -1.89
Col1a1P11087 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Col1a1P11087 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col1a1P11087 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col1a1P11087 Gm12001-201ENSMUST00000121727 913 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Gm23213-201ENSMUST00000122715 313 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.23□□□□□ -1.89
Col1a1P11087 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col1a1P11087 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.23□□□□□ -1.89
Col1a1P11087 Gm17091-201ENSMUST00000163248 357 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Gm2427-201ENSMUST00000189121 881 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.23□□□□□ -1.89
Col1a1P11087 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.23□□□□□ -1.89
Col1a1P11087 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col1a1P11087 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.23□□□□□ -1.89
Col1a1P11087 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col1a1P11087 Gm23902-201ENSMUST00000157571 134 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm25476-201ENSMUST00000175125 185 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col1a1P11087 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm44208-201ENSMUST00000205199 421 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.22□□□□□ -1.89
Col1a1P11087 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm7204-201ENSMUST00000062591 600 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.22□□□□□ -1.89
Col1a1P11087 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col1a1P11087 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col1a1P11087 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.22□□□□□ -1.89
Col1a1P11087 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms