Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Mir592-201ENSMUST00000102113 96 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm24469-201ENSMUST00000104487 131 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm9850-201ENSMUST00000117916 227 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm23228-201ENSMUST00000157296 270 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Mir1947-201ENSMUST00000158235 85 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm27611-201ENSMUST00000184690 108 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.12□□□□□ -1.91
ApoeP08226 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm38329-201ENSMUST00000193473 427 ntBASIC3.12□□□□□ -1.91
ApoeP08226 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.12□□□□□ -1.91
ApoeP08226 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.12□□□□□ -1.91
ApoeP08226 Gm45105-201ENSMUST00000207824 397 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm44656-201ENSMUST00000208428 490 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm18645-202ENSMUST00000212222 760 ntBASIC3.12□□□□□ -1.91
ApoeP08226 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.12□□□□□ -1.91
ApoeP08226 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.12□□□□□ -1.91
ApoeP08226 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.12□□□□□ -1.91
ApoeP08226 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.12□□□□□ -1.91
ApoeP08226 Gm46234-201ENSMUST00000218702 259 ntBASIC3.12□□□□□ -1.91
ApoeP08226 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ApoeP08226 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
ApoeP08226 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.12□□□□□ -1.91
ApoeP08226 Gm25630-201ENSMUST00000084000 162 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Gm10704-201ENSMUST00000098952 730 ntBASIC3.12□□□□□ -1.91
ApoeP08226 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ApoeP08226 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ApoeP08226 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ApoeP08226 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm24987-201ENSMUST00000104453 134 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm3940-201ENSMUST00000105087 432 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm8260-201ENSMUST00000119230 353 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm13574-201ENSMUST00000120482 394 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm22816-201ENSMUST00000157450 117 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm8161-201ENSMUST00000168739 481 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm20811-201ENSMUST00000190500 553 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ApoeP08226 Gm18327-201ENSMUST00000202426 830 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm44404-201ENSMUST00000203979 636 ntBASIC3.11□□□□□ -1.91
ApoeP08226 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.11□□□□□ -1.91
ApoeP08226 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm23628-201ENSMUST00000082464 173 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gm25004-201ENSMUST00000083811 161 ntBASIC3.11□□□□□ -1.91
ApoeP08226 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ApoeP08226 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ApoeP08226 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ApoeP08226 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ApoeP08226 Mir294-201ENSMUST00000104710 84 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm14811-201ENSMUST00000117070 117 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm9009-201ENSMUST00000117321 326 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm5757-201ENSMUST00000117494 528 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm9157-201ENSMUST00000117673 225 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm16458-201ENSMUST00000121428 502 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
ApoeP08226 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ApoeP08226 Gm23098-201ENSMUST00000157552 299 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm23587-201ENSMUST00000157658 84 ntBASIC3.1□□□□□ -1.91
ApoeP08226 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ApoeP08226 Gm17194-201ENSMUST00000164610 348 ntBASIC3.1□□□□□ -1.91
ApoeP08226 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ApoeP08226 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm25942-201ENSMUST00000180080 110 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm6113-201ENSMUST00000180319 639 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Gm7634-201ENSMUST00000185778 553 ntBASIC3.1□□□□□ -1.91
ApoeP08226 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms