Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Gm26449-201ENSMUST00000082452 104 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 Mir346-201ENSMUST00000083547 98 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.96□□□□□ -1.78
Cbx4O55187 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cbx4O55187 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cbx4O55187 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm24318-201ENSMUST00000104490 131 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Mir883a-201ENSMUST00000104824 76 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm12891-201ENSMUST00000119358 240 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm11438-201ENSMUST00000121582 189 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm14473-201ENSMUST00000122269 557 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm26362-201ENSMUST00000158865 315 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm2389-201ENSMUST00000160487 189 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.95□□□□□ -1.78
Cbx4O55187 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cbx4O55187 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm26194-201ENSMUST00000175036 71 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm23648-201ENSMUST00000180301 107 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Mir6926-201ENSMUST00000184562 68 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm28655-201ENSMUST00000191538 692 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm5552-201ENSMUST00000197149 515 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm4644-201ENSMUST00000197587 400 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm42164-201ENSMUST00000198881 379 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm44371-201ENSMUST00000204148 467 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Cbx4O55187 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Snord14e-201ENSMUST00000082857 90 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm23506-201ENSMUST00000083077 107 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm25126-201ENSMUST00000083343 102 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Mir34b-201ENSMUST00000083558 84 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm23733-201ENSMUST00000083750 106 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm24446-201ENSMUST00000083982 156 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cbx4O55187 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cbx4O55187 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cbx4O55187 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.95□□□□□ -1.78
Cbx4O55187 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Cbx4O55187 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cbx4O55187 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cbx4O55187 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm2005-201ENSMUST00000120759 542 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm7618-201ENSMUST00000121643 171 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm14848-201ENSMUST00000121850 467 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm22789-201ENSMUST00000157884 130 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm17159-201ENSMUST00000169043 482 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cbx4O55187 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cbx4O55187 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm14527-201ENSMUST00000179300 639 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm29413-201ENSMUST00000186019 880 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm29639-201ENSMUST00000188375 580 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.94□□□□□ -1.78
Cbx4O55187 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cbx4O55187 Gm44125-201ENSMUST00000203068 448 ntBASIC3.94□□□□□ -1.78
Cbx4O55187 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 718.2 ms