Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm12255-201ENSMUST00000117184 284 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm14706-201ENSMUST00000117744 255 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm14220-201ENSMUST00000118114 449 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm13491-201ENSMUST00000118267 235 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm13064-201ENSMUST00000119125 557 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm14352-201ENSMUST00000119250 449 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm15490-201ENSMUST00000119894 387 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm13239-201ENSMUST00000119920 637 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm11325-201ENSMUST00000119967 469 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm12074-201ENSMUST00000120189 219 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm26256-201ENSMUST00000122499 186 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm23902-201ENSMUST00000157571 134 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm25666-201ENSMUST00000157702 107 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm24518-201ENSMUST00000180275 94 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Mir6413-201ENSMUST00000184049 108 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm29332-201ENSMUST00000190829 227 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Mir466e-201ENSMUST00000198862 84 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm38670-201ENSMUST00000199248 77 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm42643-201ENSMUST00000200504 279 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm43440-201ENSMUST00000201957 729 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm43945-201ENSMUST00000203595 754 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm45614-201ENSMUST00000209994 721 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm18854-201ENSMUST00000211196 329 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm23456-201ENSMUST00000083335 137 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm23848-201ENSMUST00000083826 106 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.48□□□□□ -1.69
Pcdh1F7BJK1 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm12423-201ENSMUST00000118334 135 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm11975-201ENSMUST00000118772 481 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm12564-201ENSMUST00000119860 321 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm14516-201ENSMUST00000120012 252 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm25058-201ENSMUST00000157365 128 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mir1970-201ENSMUST00000157839 104 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm25865-201ENSMUST00000158247 104 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mir7087-201ENSMUST00000184840 70 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm9442-201ENSMUST00000194242 319 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm18551-201ENSMUST00000195594 642 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm42666-201ENSMUST00000201954 152 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm45215-201ENSMUST00000206407 395 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm7117-201ENSMUST00000071515 387 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mir133b-201ENSMUST00000083546 119 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.47□□□□□ -1.69
Pcdh1F7BJK1 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Pcdh1F7BJK1 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms