Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm5649-201ENSMUST00000217918 951 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 AC139638.1-201ENSMUST00000218027 364 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm24144-201ENSMUST00000082632 111 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Mir27a-201ENSMUST00000083510 87 ntBASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm22370-201ENSMUST00000102422 83 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm26418-201ENSMUST00000104275 137 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm14579-201ENSMUST00000117068 283 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm14172-201ENSMUST00000118255 644 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm7209-201ENSMUST00000122339 333 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm23325-201ENSMUST00000157422 129 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm22330-201ENSMUST00000158068 115 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm15974-201ENSMUST00000159103 531 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm20773-201ENSMUST00000178940 681 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm27893-201ENSMUST00000184408 194 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm29105-201ENSMUST00000187256 450 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm33973-201ENSMUST00000195148 534 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm42593-201ENSMUST00000198469 377 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm43559-201ENSMUST00000198755 466 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm44355-201ENSMUST00000200417 104 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm45574-201ENSMUST00000210921 331 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm45796-201ENSMUST00000212483 114 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm3213-201ENSMUST00000219296 441 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Snora36b-201ENSMUST00000104383 132 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm12803-201ENSMUST00000118907 821 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm13273-201ENSMUST00000119737 159 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm12685-201ENSMUST00000121702 214 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm16060-201ENSMUST00000153140 478 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm24436-201ENSMUST00000157889 302 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm25432-201ENSMUST00000158284 66 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm5967-201ENSMUST00000172723 494 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Mir6386-201ENSMUST00000183558 104 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm29408-201ENSMUST00000187536 216 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm28802-201ENSMUST00000188624 944 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm37219-201ENSMUST00000192036 926 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm38214-201ENSMUST00000192581 988 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm37670-201ENSMUST00000193622 229 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm42502-201ENSMUST00000198550 1089 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm44927-201ENSMUST00000207573 716 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm44688-201ENSMUST00000209083 537 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm18597-201ENSMUST00000209519 694 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm45380-201ENSMUST00000210465 315 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Snord22-201ENSMUST00000083153 126 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trav12d-3A0A075B6A4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
Trav12d-3A0A075B6A4 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trav12d-3A0A075B6A4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trav12d-3A0A075B6A4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms