Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm6030-201ENSMUST00000078768 402 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Gm26121-201ENSMUST00000083364 162 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav8-1A0A075B641 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Mir499-201ENSMUST00000102357 79 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm22320-201ENSMUST00000157149 312 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm22330-201ENSMUST00000158068 115 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm23028-201ENSMUST00000158773 265 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm22917-201ENSMUST00000180116 110 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm26866-201ENSMUST00000180414 802 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm27893-201ENSMUST00000184408 194 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm38214-201ENSMUST00000192581 988 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm37495-201ENSMUST00000194590 264 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm37417-201ENSMUST00000195257 454 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm3010-201ENSMUST00000198805 448 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm4501-201ENSMUST00000207330 551 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm4558-201ENSMUST00000207886 521 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm9628-201ENSMUST00000222169 725 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 CT030662.3-201ENSMUST00000228751 476 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Snora7a-201ENSMUST00000082629 140 ntBASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav8-1A0A075B641 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm24125-201ENSMUST00000104105 137 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 n-R5s31-201ENSMUST00000104162 110 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm15074-201ENSMUST00000117603 936 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm12427-201ENSMUST00000117719 302 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm13487-201ENSMUST00000122240 864 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm16533-201ENSMUST00000140035 228 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Mir1934-201ENSMUST00000158127 83 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm9613-201ENSMUST00000171662 196 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm22897-201ENSMUST00000197860 128 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm25203-202ENSMUST00000200458 216 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm19177-201ENSMUST00000204520 613 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm34779-201ENSMUST00000210036 263 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm7380-201ENSMUST00000211599 466 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm19987-201ENSMUST00000216339 499 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 AC129323.1-201ENSMUST00000216733 470 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm19599-201ENSMUST00000218898 358 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 AC153975.1-201ENSMUST00000220087 926 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 AC154576.2-202ENSMUST00000223916 688 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 AC102575.1-201ENSMUST00000225348 547 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 AC160999.1-201ENSMUST00000225675 810 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm25203-201ENSMUST00000082842 215 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm24919-201ENSMUST00000083020 106 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm38382-201ENSMUST00000193790 2499 ntBASIC2□□□□□ -2.09
Trav8-1A0A075B641 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav8-1A0A075B641 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Gm22107-201ENSMUST00000122548 100 ntBASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Gm26088-201ENSMUST00000157896 131 ntBASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Gm23799-201ENSMUST00000175559 120 ntBASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Mir6963-201ENSMUST00000183535 71 ntBASIC1.99□□□□□ -2.09
Trav8-1A0A075B641 Gm27700-201ENSMUST00000185003 81 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms