Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm26458-201ENSMUST00000082832 128 ntBASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Gm23096-201ENSMUST00000083447 107 ntBASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Gm26165-201ENSMUST00000083791 138 ntBASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Gm38382-201ENSMUST00000193790 2499 ntBASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav4d-3A0A075B625 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm14103-201ENSMUST00000119075 366 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm23791-201ENSMUST00000122553 293 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm22651-201ENSMUST00000157872 94 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm22516-201ENSMUST00000158266 124 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm24546-201ENSMUST00000158652 102 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm8902-201ENSMUST00000174341 1096 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm20672-201ENSMUST00000176605 261 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm20651-201ENSMUST00000177219 329 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Mir6363-201ENSMUST00000184880 114 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm18445-201ENSMUST00000195502 774 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Igkv1-115-201ENSMUST00000198714 302 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm19987-201ENSMUST00000216339 499 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm7119-201ENSMUST00000221345 695 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 CT030135.1-201ENSMUST00000223760 570 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 CT009604.2-201ENSMUST00000225531 377 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 AC160999.1-201ENSMUST00000225675 810 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 AC118639.1-204ENSMUST00000226401 694 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 AC115291.2-201ENSMUST00000228335 437 ntBASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trav4d-3A0A075B625 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm43881-201ENSMUST00000203051 2530 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm14159-201ENSMUST00000119832 451 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm15190-201ENSMUST00000120855 276 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm5924-201ENSMUST00000132554 871 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm25058-201ENSMUST00000157365 128 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm22588-201ENSMUST00000157510 140 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Mir1927-201ENSMUST00000158579 109 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm5929-201ENSMUST00000166883 487 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Mir3470b-201ENSMUST00000175563 126 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm22395-201ENSMUST00000177427 96 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm27786-201ENSMUST00000184337 70 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm29104-201ENSMUST00000186304 222 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm44600-201ENSMUST00000208540 111 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm3565-201ENSMUST00000222670 609 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm40598-201ENSMUST00000222953 547 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 AC166369.1-201ENSMUST00000228126 351 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm23249-201ENSMUST00000083369 161 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm8074-201ENSMUST00000095071 252 ntBASIC1.84□□□□□ -2.11
Trav4d-3A0A075B625 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.84□□□□□ -2.12
Trav4d-3A0A075B625 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav4d-3A0A075B625 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Trav4d-3A0A075B625 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm24280-201ENSMUST00000104237 134 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm2288-201ENSMUST00000118560 638 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm12222-201ENSMUST00000121368 260 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm13973-201ENSMUST00000121371 894 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm11819-201ENSMUST00000122192 372 ntBASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav4d-3A0A075B625 Gm13901-201ENSMUST00000137252 468 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms