Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm21960-201ENSMUST00000181924 452 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm27155-201ENSMUST00000183716 898 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm5309-201ENSMUST00000197416 677 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm17989-201ENSMUST00000211543 412 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm25739-201ENSMUST00000082886 107 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm10780-201ENSMUST00000099459 285 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Scn5aQ9JJV9 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm23960-201ENSMUST00000157206 131 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm24914-201ENSMUST00000157285 313 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm24002-201ENSMUST00000158456 104 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm37002-201ENSMUST00000194560 373 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm6064-201ENSMUST00000203999 454 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm19126-201ENSMUST00000207896 509 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Snora31-201ENSMUST00000083213 130 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm13443-201ENSMUST00000120770 555 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm22111-201ENSMUST00000178010 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm23687-201ENSMUST00000178664 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm24566-201ENSMUST00000179286 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm23305-201ENSMUST00000179342 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm26389-201ENSMUST00000179819 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm22130-201ENSMUST00000179979 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm22393-201ENSMUST00000180153 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm25085-201ENSMUST00000180298 79 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm45367-201ENSMUST00000210171 347 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.39□□□□□ -1.87
Scn5aQ9JJV9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm23424-201ENSMUST00000103889 110 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm23791-201ENSMUST00000122553 293 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm22141-201ENSMUST00000157403 277 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm22378-201ENSMUST00000157481 111 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm26215-201ENSMUST00000158584 139 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21842-201ENSMUST00000177552 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21626-201ENSMUST00000177791 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21562-201ENSMUST00000177888 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21539-201ENSMUST00000177925 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21599-201ENSMUST00000178249 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21914-201ENSMUST00000178452 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21723-201ENSMUST00000178692 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21916-201ENSMUST00000178771 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21801-201ENSMUST00000178865 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21633-201ENSMUST00000178941 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17412-201ENSMUST00000179261 468 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21821-201ENSMUST00000179646 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm5527-201ENSMUST00000179821 642 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21588-201ENSMUST00000180074 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21780-201ENSMUST00000180128 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21572-201ENSMUST00000180134 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm21529-201ENSMUST00000180175 498 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm7870-201ENSMUST00000184467 616 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm29370-202ENSMUST00000187476 499 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms