Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm14897-201ENSMUST00000118213 207 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm6762-201ENSMUST00000121769 289 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm25058-201ENSMUST00000157365 128 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm23023-201ENSMUST00000158767 109 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm26866-201ENSMUST00000180414 802 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Mir6960-201ENSMUST00000183449 61 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Mir7006-201ENSMUST00000183624 69 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm43722-201ENSMUST00000196054 124 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm43070-201ENSMUST00000196938 415 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm44688-201ENSMUST00000209083 537 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm45367-201ENSMUST00000210171 347 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.17□□□□□ -2.06
Smco4Q9JIS3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm5924-201ENSMUST00000132554 871 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm8292-201ENSMUST00000162574 396 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm27893-201ENSMUST00000184408 194 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm38283-201ENSMUST00000193041 695 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm36954-201ENSMUST00000195362 363 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm42983-201ENSMUST00000199879 815 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm23456-201ENSMUST00000083335 137 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm23096-201ENSMUST00000083447 107 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.16□□□□□ -2.06
Smco4Q9JIS3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
Smco4Q9JIS3 Gm14667-201ENSMUST00000119448 1350 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm26100-201ENSMUST00000157245 127 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm22588-201ENSMUST00000157510 140 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm24240-201ENSMUST00000157785 135 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm25519-201ENSMUST00000158392 127 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm24546-201ENSMUST00000158652 102 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Snord93-201ENSMUST00000175580 71 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm22395-201ENSMUST00000177427 96 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm37097-201ENSMUST00000193676 336 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm25203-202ENSMUST00000200458 216 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm19244-201ENSMUST00000204340 253 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm45192-201ENSMUST00000206749 283 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm18597-201ENSMUST00000209519 694 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Smco4Q9JIS3 Gm25203-201ENSMUST00000082842 215 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms