Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm24443-201ENSMUST00000157242 132 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm43932-201ENSMUST00000204499 52 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm18346-201ENSMUST00000216782 325 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm9765-201ENSMUST00000043170 321 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm12931-201ENSMUST00000117046 324 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm23168-201ENSMUST00000157156 143 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Mir8118-201ENSMUST00000183962 129 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Mir6926-201ENSMUST00000184562 68 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm27952-201ENSMUST00000184748 105 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Mir6975-201ENSMUST00000184879 61 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm28802-201ENSMUST00000188624 944 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm19030-201ENSMUST00000194947 552 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm42593-201ENSMUST00000198469 377 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Gm17872-201ENSMUST00000222550 532 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Hmgn3Q9DCB1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm24096-201ENSMUST00000103905 110 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm14506-201ENSMUST00000121165 536 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm25606-201ENSMUST00000158363 95 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm23505-201ENSMUST00000158989 130 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Mir6363-201ENSMUST00000184880 114 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm44964-201ENSMUST00000207011 273 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 AC155266.1-201ENSMUST00000220762 904 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgn3Q9DCB1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm24061-201ENSMUST00000157489 120 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm3030-201ENSMUST00000163410 516 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm3339-201ENSMUST00000163462 475 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm6900-201ENSMUST00000178971 342 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms