Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm14975-201ENSMUST00000118741 664 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm11913-201ENSMUST00000119094 336 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm15231-201ENSMUST00000119174 447 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm11708-201ENSMUST00000119530 832 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm12105-201ENSMUST00000120846 779 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm23671-201ENSMUST00000157472 103 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm22840-201ENSMUST00000158444 136 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Mir129b-201ENSMUST00000197461 65 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm34272-201ENSMUST00000208886 253 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm45539-201ENSMUST00000210313 428 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm45273-201ENSMUST00000211559 281 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm45814-201ENSMUST00000212646 775 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm18704-201ENSMUST00000219736 446 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.2□□□□□ -1.9
Use1Q9CQ56 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm9157-201ENSMUST00000117673 225 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm11367-201ENSMUST00000117802 120 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm12090-201ENSMUST00000118692 758 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm14627-201ENSMUST00000118931 567 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm13574-201ENSMUST00000120482 394 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm25105-201ENSMUST00000122477 130 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm8161-201ENSMUST00000168739 481 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm27392-201ENSMUST00000185041 101 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm28148-201ENSMUST00000186924 697 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm6680-201ENSMUST00000192789 950 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm18340-201ENSMUST00000196342 609 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm46369-201ENSMUST00000221577 401 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm12582-201ENSMUST00000030555 697 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.19□□□□□ -1.9
Use1Q9CQ56 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Use1Q9CQ56 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm22758-201ENSMUST00000102275 96 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm14811-201ENSMUST00000117070 117 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm12125-201ENSMUST00000117261 736 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm14518-201ENSMUST00000117351 542 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm9119-201ENSMUST00000118866 495 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm12137-201ENSMUST00000119565 346 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm11693-201ENSMUST00000119625 565 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm13692-201ENSMUST00000120774 371 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm14578-201ENSMUST00000122166 391 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm22521-201ENSMUST00000158272 134 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm22501-201ENSMUST00000158981 127 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Mir3106-201ENSMUST00000175401 82 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm24417-201ENSMUST00000178123 79 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm24653-201ENSMUST00000178541 79 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm25934-201ENSMUST00000178642 79 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm23816-201ENSMUST00000179617 132 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm25412-201ENSMUST00000180258 107 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms