Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx6-1Q99MA9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Nkx6-1Q99MA9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx6-1Q99MA9 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx6-1Q99MA9 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Nkx6-1Q99MA9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.84□□□□□ -1.64
Nkx6-1Q99MA9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nkx6-1Q99MA9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Nkx6-1Q99MA9 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm23593-201ENSMUST00000104309 120 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm12683-201ENSMUST00000117528 415 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm12281-201ENSMUST00000119536 298 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm11200-201ENSMUST00000121698 448 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm13745-201ENSMUST00000121994 527 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm26098-201ENSMUST00000157247 288 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm17183-201ENSMUST00000171170 493 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm26180-201ENSMUST00000179942 107 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm19206-201ENSMUST00000186401 827 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm28163-201ENSMUST00000187099 325 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm28629-201ENSMUST00000187309 263 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm20923-201ENSMUST00000190009 319 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm19193-201ENSMUST00000190263 590 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm28552-201ENSMUST00000190725 388 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm9134-201ENSMUST00000193186 551 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm37670-201ENSMUST00000193622 229 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm38076-201ENSMUST00000193889 450 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm37616-201ENSMUST00000193974 322 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm45236-201ENSMUST00000208632 229 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm46327-201ENSMUST00000218240 365 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm22740-201ENSMUST00000083439 109 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nkx6-1Q99MA9 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Mir599-201ENSMUST00000102378 88 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm23608-201ENSMUST00000104545 128 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm23214-201ENSMUST00000122716 157 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm23169-201ENSMUST00000157157 112 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm24780-201ENSMUST00000157635 143 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm23411-201ENSMUST00000157988 62 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm24905-201ENSMUST00000158129 104 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Mir5099-201ENSMUST00000175257 74 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm27611-201ENSMUST00000184690 108 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm43355-201ENSMUST00000196541 346 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm44858-201ENSMUST00000207360 154 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm44852-201ENSMUST00000207950 369 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Gm23677-201ENSMUST00000083156 104 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 Snora30-201ENSMUST00000083325 130 ntBASIC4.82□□□□□ -1.64
Nkx6-1Q99MA9 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms