Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm37387-201ENSMUST00000192201 1806 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Mir667-201ENSMUST00000102441 92 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm23440-201ENSMUST00000104299 130 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm23219-201ENSMUST00000158123 87 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm17119-201ENSMUST00000163943 280 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Mir669k-201ENSMUST00000177742 127 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm25673-201ENSMUST00000179957 127 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm27608-201ENSMUST00000184822 162 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm29489-201ENSMUST00000188934 324 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm29592-201ENSMUST00000189434 370 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm43991-201ENSMUST00000203751 274 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm45315-201ENSMUST00000209283 333 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm18413-201ENSMUST00000221573 655 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Gm44821-201ENSMUST00000208212 2002 ntBASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdhgb4Q91XX6 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm24124-201ENSMUST00000104103 132 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm26147-201ENSMUST00000104479 114 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm11572-201ENSMUST00000119164 120 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm13557-201ENSMUST00000120771 382 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm5379-201ENSMUST00000120973 826 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm12488-201ENSMUST00000122449 499 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm25103-201ENSMUST00000122671 318 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm24767-201ENSMUST00000158509 95 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm28872-201ENSMUST00000191518 158 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 AC192091.2-201ENSMUST00000217869 117 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 AC130536.1-201ENSMUST00000224425 271 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 AC129308.2-201ENSMUST00000224588 789 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 AC167420.1-201ENSMUST00000222999 2121 ntBASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Pcdhgb4Q91XX6 Gm14914-201ENSMUST00000117576 2031 ntBASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Gm37983-201ENSMUST00000193207 2006 ntBASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdhgb4Q91XX6 Snord19-201ENSMUST00000104609 76 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms