Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm43405-201ENSMUST00000198642 337 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm7726-201ENSMUST00000206241 231 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm18672-201ENSMUST00000208035 270 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm46312-201ENSMUST00000220961 420 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm46994-201ENSMUST00000221523 219 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Gm22265-201ENSMUST00000082947 116 ntBASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Ushbp1Q8R370 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm16431-201ENSMUST00000117454 431 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm11268-201ENSMUST00000118347 267 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm14793-201ENSMUST00000118739 311 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm12719-201ENSMUST00000118859 241 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm6591-201ENSMUST00000121063 434 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm13973-201ENSMUST00000121371 894 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm6969-201ENSMUST00000140065 342 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm16331-201ENSMUST00000144274 498 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm36953-201ENSMUST00000195295 268 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm18016-201ENSMUST00000216119 801 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm6462-201ENSMUST00000081488 304 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm22155-201ENSMUST00000083836 162 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Ushbp1Q8R370 Synpr-207ENSMUST00000223583 3362 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm13803-201ENSMUST00000117547 489 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm12311-201ENSMUST00000118803 374 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm12564-201ENSMUST00000119860 321 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm11438-201ENSMUST00000121582 189 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm14411-201ENSMUST00000121798 914 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm17155-201ENSMUST00000165969 473 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm27957-201ENSMUST00000184054 127 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm29097-201ENSMUST00000190273 422 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm43494-201ENSMUST00000197672 388 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm44059-201ENSMUST00000204048 351 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ushbp1Q8R370 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ushbp1Q8R370 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms