Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.27□□□□□ -1.73
Nup88Q8CEC0 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Nup88Q8CEC0 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm7869-201ENSMUST00000121457 1322 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm14517-201ENSMUST00000119040 337 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm12118-201ENSMUST00000119766 532 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm23960-201ENSMUST00000157206 131 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm23034-201ENSMUST00000158001 147 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm25369-201ENSMUST00000158848 132 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm29920-201ENSMUST00000206876 754 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm18268-201ENSMUST00000208445 943 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm35857-201ENSMUST00000212739 178 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm46103-201ENSMUST00000217614 341 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.26□□□□□ -1.73
Nup88Q8CEC0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm25272-201ENSMUST00000104293 128 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm12495-201ENSMUST00000119750 447 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm12897-201ENSMUST00000120341 250 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm12383-201ENSMUST00000120628 760 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm22818-201ENSMUST00000157446 104 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm25977-201ENSMUST00000158697 85 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm20773-201ENSMUST00000178940 681 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm37097-201ENSMUST00000193676 336 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm45226-201ENSMUST00000206602 288 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm18892-201ENSMUST00000217628 881 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 AC153646.1-201ENSMUST00000223229 1279 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm23925-201ENSMUST00000082471 132 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm22864-201ENSMUST00000083950 130 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.25□□□□□ -1.73
Nup88Q8CEC0 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm12691-201ENSMUST00000120186 456 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm22817-201ENSMUST00000157448 356 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm24008-201ENSMUST00000157733 138 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm20648-201ENSMUST00000175815 328 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm3454-201ENSMUST00000185571 412 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm6947-201ENSMUST00000186254 78 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm9722-201ENSMUST00000194568 802 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm44349-201ENSMUST00000197048 123 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm44475-201ENSMUST00000204041 424 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm44634-201ENSMUST00000206119 152 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Gm35262-201ENSMUST00000215133 267 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 AC127302.1-201ENSMUST00000215973 1111 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.24□□□□□ -1.73
Nup88Q8CEC0 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms