Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir669d-2-201ENSMUST00000116854 86 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm11874-201ENSMUST00000117437 130 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm13550-201ENSMUST00000118185 525 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm14771-201ENSMUST00000118249 203 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm15443-201ENSMUST00000118947 820 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm15263-201ENSMUST00000121556 642 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm14916-201ENSMUST00000121904 204 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm8200-201ENSMUST00000122390 222 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm14651-201ENSMUST00000147192 442 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm25965-201ENSMUST00000157170 93 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Mir7047-201ENSMUST00000184595 64 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm28594-201ENSMUST00000187022 661 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm8790-201ENSMUST00000194108 322 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm38008-201ENSMUST00000195333 518 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm44354-201ENSMUST00000196017 143 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm43559-201ENSMUST00000198755 466 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm43224-201ENSMUST00000201567 898 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm44765-201ENSMUST00000206927 601 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm7034-201ENSMUST00000218638 645 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm336-201ENSMUST00000186376 1480 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm24430-201ENSMUST00000104077 104 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm13614-201ENSMUST00000117306 503 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm14714-201ENSMUST00000119743 439 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm13574-201ENSMUST00000120482 394 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm13339-201ENSMUST00000120651 510 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm12340-201ENSMUST00000121617 462 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm9003-201ENSMUST00000121810 482 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm6969-201ENSMUST00000140065 342 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm4487-201ENSMUST00000150617 442 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm27695-201ENSMUST00000184301 91 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm17991-201ENSMUST00000208139 297 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm44946-201ENSMUST00000208425 572 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm46138-201ENSMUST00000215294 426 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm46998-201ENSMUST00000221444 330 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm23097-201ENSMUST00000083448 105 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Vps53Q8CCB4 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm26075-201ENSMUST00000104062 121 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm25169-201ENSMUST00000104190 129 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm26019-201ENSMUST00000104407 119 ntBASIC4.84□□□□□ -1.63
Vps53Q8CCB4 Gm5757-201ENSMUST00000117494 528 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms