Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim56Q80VI1 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm13491-201ENSMUST00000118267 235 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm15493-201ENSMUST00000119461 528 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm13787-201ENSMUST00000120422 168 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm12893-201ENSMUST00000121732 275 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm14821-201ENSMUST00000121975 435 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm25339-201ENSMUST00000157458 232 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm24751-201ENSMUST00000157844 102 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm28847-201ENSMUST00000186778 700 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm23925-202ENSMUST00000188429 132 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm21088-201ENSMUST00000190875 316 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm28408-201ENSMUST00000191557 463 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm42566-201ENSMUST00000197120 643 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm44348-201ENSMUST00000200165 122 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm43975-201ENSMUST00000203023 481 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm19096-201ENSMUST00000209705 766 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm18258-201ENSMUST00000210413 542 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm45735-201ENSMUST00000212779 319 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm20102-201ENSMUST00000222445 220 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.57□□□□□ -1.52
Trim56Q80VI1 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trim56Q80VI1 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm23014-201ENSMUST00000104144 130 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm11408-201ENSMUST00000117889 519 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm13228-201ENSMUST00000118937 634 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm12787-201ENSMUST00000119234 396 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm11862-201ENSMUST00000119678 659 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm12739-201ENSMUST00000119769 382 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm27190-201ENSMUST00000184890 542 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm21856-201ENSMUST00000187547 696 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm21735-201ENSMUST00000190360 696 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm44060-201ENSMUST00000204440 410 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm44852-201ENSMUST00000207950 369 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm45438-201ENSMUST00000210242 564 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm31849-201ENSMUST00000220306 375 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm8288-201ENSMUST00000223406 593 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 AV026068-237ENSMUST00000226075 572 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Gm25818-201ENSMUST00000083282 164 ntBASIC5.56□□□□□ -1.52
Trim56Q80VI1 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim56Q80VI1 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim56Q80VI1 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm15364-201ENSMUST00000119618 585 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm12237-201ENSMUST00000120158 470 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm24251-201ENSMUST00000157324 114 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm16038-201ENSMUST00000159317 193 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms