Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm5372-201ENSMUST00000187540 409 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm28397-201ENSMUST00000187970 699 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm29366-201ENSMUST00000190481 699 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm42758-201ENSMUST00000202146 283 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm45316-201ENSMUST00000210128 162 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm2628-201ENSMUST00000218019 426 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm20304-201ENSMUST00000218168 444 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm10916-201ENSMUST00000080330 483 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ubfd1Q78JW9 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Mir599-201ENSMUST00000102378 88 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm13454-201ENSMUST00000118166 483 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm14469-201ENSMUST00000118363 202 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm14566-201ENSMUST00000118915 321 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Clec2f-201ENSMUST00000121051 374 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm11692-201ENSMUST00000122121 902 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm22613-201ENSMUST00000122679 292 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm23538-201ENSMUST00000157535 101 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm24675-201ENSMUST00000158757 259 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm27899-201ENSMUST00000184715 64 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Mir6975-201ENSMUST00000184879 61 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Mir496b-201ENSMUST00000184935 113 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm29545-201ENSMUST00000188878 694 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm38150-201ENSMUST00000192996 452 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm43304-201ENSMUST00000196803 326 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm9236-201ENSMUST00000196892 587 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm43550-201ENSMUST00000200597 303 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm45049-201ENSMUST00000207586 591 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm18225-201ENSMUST00000216708 742 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.23□□□□□ -1.73
Ubfd1Q78JW9 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm12370-201ENSMUST00000117809 604 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm11398-201ENSMUST00000120330 320 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms