Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm13329-201ENSMUST00000117063 265 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm24937-201ENSMUST00000122597 134 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm25863-201ENSMUST00000158249 329 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm44844-201ENSMUST00000207242 336 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm7422-201ENSMUST00000220115 640 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Scn9aQ62205 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.44□□□□□ -1.86
Scn9aQ62205 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Scn9aQ62205 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Scn9aQ62205 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Scn9aQ62205 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm12090-201ENSMUST00000118692 758 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.43□□□□□ -1.86
Scn9aQ62205 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Mir21a-201ENSMUST00000083521 92 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm4017-201ENSMUST00000084813 338 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm10343-201ENSMUST00000096279 348 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scn9aQ62205 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm25500-201ENSMUST00000104426 123 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm11387-201ENSMUST00000120266 772 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm7327-201ENSMUST00000120925 652 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.43□□□□□ -1.86
Scn9aQ62205 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Gm18921-201ENSMUST00000221798 366 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.43□□□□□ -1.86
Scn9aQ62205 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm14142-201ENSMUST00000117833 296 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm22099-201ENSMUST00000157925 123 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm22961-201ENSMUST00000157964 106 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm38356-201ENSMUST00000194313 408 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.42□□□□□ -1.86
Scn9aQ62205 Diaph3-206ENSMUST00000226745 713 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm24291-201ENSMUST00000157633 162 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm20612-201ENSMUST00000176318 236 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm29038-201ENSMUST00000191543 678 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm8209-201ENSMUST00000206386 553 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 Gm45710-201ENSMUST00000212847 215 ntBASIC3.42□□□□□ -1.86
Scn9aQ62205 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.42□□□□□ -1.86
Scn9aQ62205 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Scn9aQ62205 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm12598-201ENSMUST00000117333 830 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm14943-201ENSMUST00000118056 546 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Mir6418-201ENSMUST00000185075 115 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm28500-201ENSMUST00000190286 151 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.41□□□□□ -1.86
Scn9aQ62205 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Trbv10-201ENSMUST00000168322 289 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Gm20718-201ENSMUST00000176058 259 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Gm27648-201ENSMUST00000184315 107 ntBASIC3.4□□□□□ -1.86
Scn9aQ62205 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Scn9aQ62205 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Scn9aQ62205 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.4□□□□□ -1.87
Scn9aQ62205 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Scn9aQ62205 Gm9427-201ENSMUST00000116187 651 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms