Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm42539-201ENSMUST00000197009 308 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col11a1Q61245 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm23011-201ENSMUST00000104148 132 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm9427-201ENSMUST00000116187 651 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm3757-201ENSMUST00000125878 675 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm25553-201ENSMUST00000158076 79 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm38166-201ENSMUST00000191660 471 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm42581-201ENSMUST00000201774 966 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.19□□□□□ -1.9
Col11a1Q61245 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm18617-201ENSMUST00000222311 259 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col11a1Q61245 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col11a1Q61245 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Col11a1Q61245 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.18□□□□□ -1.9
Col11a1Q61245 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.18□□□□□ -1.9
Col11a1Q61245 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.18□□□□□ -1.9
Col11a1Q61245 Gm23230-201ENSMUST00000157298 133 ntBASIC3.18□□□□□ -1.9
Col11a1Q61245 Gm22099-201ENSMUST00000157925 123 ntBASIC3.18□□□□□ -1.9
Col11a1Q61245 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col11a1Q61245 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col11a1Q61245 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col11a1Q61245 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col11a1Q61245 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm26015-201ENSMUST00000104402 125 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm23551-201ENSMUST00000116852 121 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm17091-201ENSMUST00000163248 357 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm21959-201ENSMUST00000178439 452 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm27315-201ENSMUST00000183977 154 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.17□□□□□ -1.9
Col11a1Q61245 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Col11a1Q61245 Gm12878-201ENSMUST00000118744 332 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm8260-201ENSMUST00000119230 353 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm22730-201ENSMUST00000158085 171 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm26379-202ENSMUST00000200225 132 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm44161-201ENSMUST00000203532 253 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.16□□□□□ -1.9
Col11a1Q61245 Mir21a-201ENSMUST00000083521 92 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col11a1Q61245 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col11a1Q61245 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm6574-201ENSMUST00000120037 362 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm14506-201ENSMUST00000121165 536 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm36985-201ENSMUST00000195595 379 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.16□□□□□ -1.9
Col11a1Q61245 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col11a1Q61245 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm43526-201ENSMUST00000196666 1565 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.16□□□□□ -1.9
Col11a1Q61245 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col11a1Q61245 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Col11a1Q61245 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.15□□□□□ -1.9
Col11a1Q61245 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.15□□□□□ -1.9
Col11a1Q61245 Gm11221-201ENSMUST00000117230 597 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Gm23895-201ENSMUST00000158108 160 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Gm20612-201ENSMUST00000176318 236 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Gm18843-201ENSMUST00000194982 719 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Gm43104-201ENSMUST00000197234 311 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Gm45312-201ENSMUST00000210566 311 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.15□□□□□ -1.91
Col11a1Q61245 Olfr844-201ENSMUST00000054106 930 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms