Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm29573-201ENSMUST00000190291 919 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm37684-201ENSMUST00000192779 355 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm37416-201ENSMUST00000193596 318 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm37523-201ENSMUST00000194901 412 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm43853-201ENSMUST00000197162 301 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm35931-201ENSMUST00000203931 448 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm44585-201ENSMUST00000207150 607 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm44656-201ENSMUST00000208428 490 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 AC154738.1-201ENSMUST00000227054 368 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.63□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm12492-201ENSMUST00000117665 564 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm12994-201ENSMUST00000119601 447 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm11931-201ENSMUST00000121630 447 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm14578-201ENSMUST00000122166 391 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm12885-201ENSMUST00000122246 328 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm25913-201ENSMUST00000157617 135 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm24550-201ENSMUST00000158648 279 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm22530-201ENSMUST00000158820 118 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Mir5134-201ENSMUST00000175529 78 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm27527-201ENSMUST00000183903 99 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm43489-201ENSMUST00000196810 993 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm44475-201ENSMUST00000204041 424 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm8820-201ENSMUST00000204077 571 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm45105-201ENSMUST00000207824 397 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm35262-201ENSMUST00000215133 267 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 AC152979.4-201ENSMUST00000219893 379 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 AC100733.1-201ENSMUST00000228494 407 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm23738-201ENSMUST00000082828 171 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm22739-201ENSMUST00000083437 160 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Mir370-201ENSMUST00000083499 79 ntBASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trav3-3Q5R1C3 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Gm7123-201ENSMUST00000117647 213 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Gm15037-201ENSMUST00000120358 259 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Gm11582-201ENSMUST00000121041 236 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Gm11645-201ENSMUST00000121589 649 ntBASIC2.61□□□□□ -1.99
Trav3-3Q5R1C3 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms