Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm37760-201ENSMUST00000194726 3841 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 AC137871.4-201ENSMUST00000226323 3901 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm24170-201ENSMUST00000104124 133 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm8430-201ENSMUST00000119780 471 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm12422-201ENSMUST00000121431 302 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm24409-201ENSMUST00000157881 152 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm43529-201ENSMUST00000199178 412 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 AC124346.1-201ENSMUST00000218539 364 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm46993-201ENSMUST00000220708 259 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm25812-201ENSMUST00000082751 103 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm38065-201ENSMUST00000193147 3492 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Gm37049-201ENSMUST00000194356 1983 ntBASIC9.23□□□□□ -0.93
Trim41Q5NCC3 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm14627-201ENSMUST00000118931 567 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm15981-201ENSMUST00000119196 457 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm12721-201ENSMUST00000120621 268 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm4222-201ENSMUST00000165784 470 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm17072-201ENSMUST00000166673 658 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm28399-201ENSMUST00000186221 318 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm28572-201ENSMUST00000187444 318 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm29350-201ENSMUST00000189141 541 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm29365-201ENSMUST00000189461 699 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 AC123064.1-201ENSMUST00000218950 406 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 AC154270.1-201ENSMUST00000227226 426 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 AC158142.2-201ENSMUST00000227892 635 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Gm37831-201ENSMUST00000191685 1787 ntBASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim41Q5NCC3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Trim41Q5NCC3 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim41Q5NCC3 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trim41Q5NCC3 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim41Q5NCC3 Gm7219-201ENSMUST00000119619 297 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Gm13511-201ENSMUST00000121167 363 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Gm24217-201ENSMUST00000158260 133 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Gm29489-201ENSMUST00000188934 324 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Gm45722-201ENSMUST00000213075 466 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 AC154305.1-201ENSMUST00000224443 450 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Snord22-201ENSMUST00000083153 126 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim41Q5NCC3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm5362-201ENSMUST00000211968 3085 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm25420-201ENSMUST00000104216 127 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm13973-201ENSMUST00000121371 894 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm14564-201ENSMUST00000122159 294 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm23534-201ENSMUST00000157539 97 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm8114-201ENSMUST00000172225 484 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm27158-201ENSMUST00000183813 238 ntBASIC9.2□□□□□ -0.94
Trim41Q5NCC3 Gm44609-201ENSMUST00000207157 460 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms