Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm11877-201ENSMUST00000118921 852 ntBASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm8880-201ENSMUST00000121800 454 ntBASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm25863-201ENSMUST00000158249 329 ntBASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Mir6386-201ENSMUST00000183558 104 ntBASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm44343-201ENSMUST00000196702 90 ntBASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Shank3Q4ACU6 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Gm17711-201ENSMUST00000172028 237 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Gm9251-201ENSMUST00000197202 628 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Gm45452-201ENSMUST00000210905 177 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Diaph3-206ENSMUST00000226745 713 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Shank3Q4ACU6 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Mir499-201ENSMUST00000102357 79 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm12598-201ENSMUST00000117333 830 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm22073-201ENSMUST00000122668 189 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm23325-201ENSMUST00000157422 129 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm24698-201ENSMUST00000083883 130 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shank3Q4ACU6 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm25500-201ENSMUST00000104426 123 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm23803-201ENSMUST00000104610 132 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm13751-201ENSMUST00000120280 752 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm23128-201ENSMUST00000104257 132 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm22378-201ENSMUST00000157481 111 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm6245-201ENSMUST00000164699 768 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm22254-201ENSMUST00000179186 110 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm23128-202ENSMUST00000196578 133 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Gm25581-201ENSMUST00000083410 164 ntBASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
Shank3Q4ACU6 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm37677-201ENSMUST00000194520 7634 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm24541-201ENSMUST00000103871 96 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm14821-201ENSMUST00000121975 435 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm7422-201ENSMUST00000220115 640 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm26494-201ENSMUST00000083154 143 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Gm24493-201ENSMUST00000083805 143 ntBASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Shank3Q4ACU6 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Shank3Q4ACU6 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Shank3Q4ACU6 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Shank3Q4ACU6 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.65□□□□□ -1.82
Shank3Q4ACU6 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.65□□□□□ -1.82
Shank3Q4ACU6 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Shank3Q4ACU6 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms