Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm42958-201ENSMUST00000197595 318 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm18462-201ENSMUST00000208112 417 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm35262-201ENSMUST00000215133 267 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm10242-201ENSMUST00000090064 330 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.46□□□□□ -1.86
Trim40Q3UWA4 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm15151-201ENSMUST00000117106 177 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm15313-201ENSMUST00000119179 282 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm16412-201ENSMUST00000121602 273 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm24059-201ENSMUST00000157493 312 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm25413-201ENSMUST00000158544 312 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm10177-202ENSMUST00000161698 207 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm6395-201ENSMUST00000167639 691 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm19807-201ENSMUST00000173971 667 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Mir6401-201ENSMUST00000184499 109 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm18667-201ENSMUST00000186523 484 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm28654-201ENSMUST00000189801 379 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm7468-201ENSMUST00000203900 652 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm44259-201ENSMUST00000204996 298 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm18729-201ENSMUST00000217230 621 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm24626-201ENSMUST00000082621 161 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm25200-201ENSMUST00000083094 130 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Mir421-201ENSMUST00000083575 76 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm8074-201ENSMUST00000095071 252 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trim40Q3UWA4 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.45□□□□□ -1.86
Trim40Q3UWA4 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm14628-201ENSMUST00000117508 635 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm25965-201ENSMUST00000157170 93 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm22143-201ENSMUST00000157401 203 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm24198-201ENSMUST00000157812 108 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm25603-201ENSMUST00000158361 105 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm24550-201ENSMUST00000158648 279 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm20574-201ENSMUST00000182867 917 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm27695-201ENSMUST00000184301 91 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm43853-201ENSMUST00000197162 301 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm44348-201ENSMUST00000200165 122 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm2314-201ENSMUST00000200391 586 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm42453-201ENSMUST00000200477 409 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm17780-201ENSMUST00000207142 612 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm6112-201ENSMUST00000208037 629 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm45912-201ENSMUST00000210646 543 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.44□□□□□ -1.86
Trim40Q3UWA4 Gm35857-201ENSMUST00000212739 178 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms