Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Gm18363-201ENSMUST00000221671 730 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 LOC667541-201ENSMUST00000223408 278 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Gm25004-201ENSMUST00000083811 161 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Upf3bQ3ULL6 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm23256-201ENSMUST00000102235 110 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm26140-201ENSMUST00000103807 110 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm11488-201ENSMUST00000117277 863 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm22956-201ENSMUST00000122520 80 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm22107-201ENSMUST00000122548 100 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm23791-201ENSMUST00000122553 293 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm22792-201ENSMUST00000157225 133 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm24720-201ENSMUST00000157518 166 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm26005-201ENSMUST00000158802 134 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm24811-201ENSMUST00000175313 100 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm22908-201ENSMUST00000177620 110 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm2092-201ENSMUST00000178887 639 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm2759-201ENSMUST00000179938 639 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm26866-201ENSMUST00000180414 802 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm27760-201ENSMUST00000185048 114 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm44118-201ENSMUST00000204665 229 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm44513-201ENSMUST00000206811 439 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm8423-201ENSMUST00000211387 607 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm9765-201ENSMUST00000043170 321 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm22304-201ENSMUST00000082688 129 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm25810-201ENSMUST00000082752 108 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf3bQ3ULL6 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Upf3bQ3ULL6 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Upf3bQ3ULL6 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Upf3bQ3ULL6 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Upf3bQ3ULL6 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm24118-201ENSMUST00000103972 126 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm14776-201ENSMUST00000121029 887 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm14589-201ENSMUST00000121640 727 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm13471-201ENSMUST00000122057 433 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm19030-201ENSMUST00000194947 552 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm17987-201ENSMUST00000206902 603 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm6842-201ENSMUST00000211361 390 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm18225-201ENSMUST00000216708 742 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Upf3bQ3ULL6 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Mir673-201ENSMUST00000102361 91 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm13511-201ENSMUST00000121167 363 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm23168-201ENSMUST00000157156 143 ntBASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upf3bQ3ULL6 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms