Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm11271-201ENSMUST00000116054 440 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm11384-201ENSMUST00000121376 303 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm14804-201ENSMUST00000122322 508 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm24439-201ENSMUST00000157894 117 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm16303-201ENSMUST00000161498 390 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm27528-201ENSMUST00000183544 205 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm28925-201ENSMUST00000188586 168 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm21735-201ENSMUST00000190360 696 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm18296-201ENSMUST00000192475 783 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm32340-201ENSMUST00000192883 259 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm18791-201ENSMUST00000204611 726 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm44657-201ENSMUST00000208568 450 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm5055-201ENSMUST00000215697 581 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 n-R5s204-201ENSMUST00000082972 119 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm24454-201ENSMUST00000083349 132 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm23650-201ENSMUST00000083355 70 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm24032-201ENSMUST00000083932 159 ntBASIC3.81□□□□□ -1.8
Trim63Q38HM4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim63Q38HM4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm14628-201ENSMUST00000117508 635 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm12062-201ENSMUST00000117533 259 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm12770-201ENSMUST00000121734 462 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm25391-201ENSMUST00000157342 134 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm24551-201ENSMUST00000158645 92 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm24713-201ENSMUST00000178850 107 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm25448-201ENSMUST00000180065 107 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Mir7072-201ENSMUST00000184542 60 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm27919-201ENSMUST00000185163 107 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm19193-201ENSMUST00000190263 590 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm28188-201ENSMUST00000190483 236 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm29950-201ENSMUST00000195273 237 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm43804-201ENSMUST00000198280 456 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm45387-201ENSMUST00000209792 632 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm18015-201ENSMUST00000214879 316 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm7802-201ENSMUST00000216464 262 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr151-202ENSMUST00000221099 929 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 AC166358.3-201ENSMUST00000221456 181 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Mir202-201ENSMUST00000083568 72 ntBASIC3.8□□□□□ -1.8
Trim63Q38HM4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim63Q38HM4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim63Q38HM4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim63Q38HM4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim63Q38HM4 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim63Q38HM4 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.79□□□□□ -1.8
Trim63Q38HM4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Trim63Q38HM4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms