Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm28204-201ENSMUST00000185934 614 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm28290-201ENSMUST00000186505 614 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm28161-201ENSMUST00000186669 614 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm29610-201ENSMUST00000187749 453 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm28749-209ENSMUST00000189599 614 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm33163-201ENSMUST00000194504 614 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm17991-201ENSMUST00000208139 297 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm46146-201ENSMUST00000217483 346 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Col28a1Q2UY11 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm23178-201ENSMUST00000116782 95 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm15175-201ENSMUST00000117629 132 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm15426-201ENSMUST00000117823 556 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm14785-201ENSMUST00000120185 539 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm15267-201ENSMUST00000120888 464 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm11344-201ENSMUST00000122011 335 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm11506-201ENSMUST00000122414 470 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm22204-201ENSMUST00000122654 327 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm22491-201ENSMUST00000157190 102 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm25185-201ENSMUST00000157754 96 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm26354-201ENSMUST00000158221 129 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm25434-201ENSMUST00000158278 167 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm22156-201ENSMUST00000158409 141 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm22668-201ENSMUST00000158716 260 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm17159-201ENSMUST00000169043 482 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm21638-201ENSMUST00000179473 836 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm28843-201ENSMUST00000189198 678 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm29546-201ENSMUST00000191171 678 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm37119-201ENSMUST00000195691 389 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm46190-201ENSMUST00000219650 427 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm46994-201ENSMUST00000221523 219 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm7984-201ENSMUST00000060640 538 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Gm23614-201ENSMUST00000082598 107 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.06□□□□□ -1.76
Col28a1Q2UY11 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Col28a1Q2UY11 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm24935-201ENSMUST00000103770 110 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm24430-201ENSMUST00000104077 104 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm13170-201ENSMUST00000119716 643 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm23792-201ENSMUST00000122557 93 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm24745-201ENSMUST00000157840 85 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm22637-201ENSMUST00000158144 283 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm22076-201ENSMUST00000158601 84 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Cfap61-214ENSMUST00000167179 183 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm4076-201ENSMUST00000179230 965 ntBASIC4.05□□□□□ -1.76
Col28a1Q2UY11 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms