Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm43658-201ENSMUST00000202348 4176 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm45483-201ENSMUST00000209845 1682 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC1.52□□□□□ -2.17
Ush2AQ2QI47 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC1.52□□□□□ -2.17
Ush2AQ2QI47 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC153887.2-201ENSMUST00000219160 3838 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC192333.5-201ENSMUST00000224620 2350 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC117199.1-201ENSMUST00000219940 3132 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm14823-201ENSMUST00000117698 238 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm23043-201ENSMUST00000157890 109 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm25836-201ENSMUST00000158918 123 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC154681.1-201ENSMUST00000225876 1735 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm24638-201ENSMUST00000179807 132 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Ighv1-41-201ENSMUST00000194414 329 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 AC125223.3-201ENSMUST00000223588 2067 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm25500-201ENSMUST00000104426 123 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm24291-201ENSMUST00000157633 162 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm22361-201ENSMUST00000158435 176 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm42828-201ENSMUST00000199669 469 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm43901-201ENSMUST00000203247 453 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm44157-201ENSMUST00000204720 410 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm44682-201ENSMUST00000208501 2614 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm5917-201ENSMUST00000217638 721 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Diaph3-206ENSMUST00000226745 713 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm25274-201ENSMUST00000104296 135 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm13664-201ENSMUST00000117304 345 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm12550-201ENSMUST00000118478 329 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm13024-201ENSMUST00000121756 718 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Gm38382-201ENSMUST00000193790 2499 ntBASIC1.51□□□□□ -2.17
Ush2AQ2QI47 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Snord93-201ENSMUST00000175580 71 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 AC144819.1-201ENSMUST00000227015 620 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm26121-201ENSMUST00000083364 162 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm43256-201ENSMUST00000199995 3091 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm25832-201ENSMUST00000104140 130 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm24879-201ENSMUST00000158386 143 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm44869-201ENSMUST00000208836 357 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm22472-201ENSMUST00000104115 134 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm14570-201ENSMUST00000119444 391 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 AC131029.2-202ENSMUST00000228430 496 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.5□□□□□ -2.17
Ush2AQ2QI47 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms