Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43155-201ENSMUST00000202661 494 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm20074-201ENSMUST00000208144 484 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col17a1Q07563 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm14600-201ENSMUST00000121032 630 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm24019-201ENSMUST00000178620 107 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm4076-201ENSMUST00000179230 965 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm26243-201ENSMUST00000179260 107 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm28997-201ENSMUST00000188759 429 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Mir6375-201ENSMUST00000197176 95 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm23296-201ENSMUST00000082555 107 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm25134-201ENSMUST00000082646 160 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm24859-201ENSMUST00000082729 107 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Gm25582-201ENSMUST00000083412 110 ntBASIC6.14□□□□□ -1.43
Col17a1Q07563 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col17a1Q07563 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Mir105-201ENSMUST00000104655 80 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm13672-201ENSMUST00000117554 459 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm22794-201ENSMUST00000157228 306 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm24636-201ENSMUST00000158673 288 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm3221-201ENSMUST00000164869 440 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Trbv7-201ENSMUST00000193339 402 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm43476-201ENSMUST00000197873 405 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm44773-201ENSMUST00000207374 557 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.13□□□□□ -1.43
Col17a1Q07563 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Mir465-201ENSMUST00000093563 74 ntBASIC6.13□□□□□ -1.43
Col17a1Q07563 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col17a1Q07563 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col17a1Q07563 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Mir669i-201ENSMUST00000117007 127 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm12268-201ENSMUST00000118398 442 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm23981-201ENSMUST00000157136 106 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm25553-201ENSMUST00000158076 79 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Mir7068-201ENSMUST00000183439 74 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col17a1Q07563 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col17a1Q07563 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm9845-201ENSMUST00000056409 598 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.12□□□□□ -1.43
Col17a1Q07563 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col17a1Q07563 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col17a1Q07563 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm12386-201ENSMUST00000117380 688 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm11704-201ENSMUST00000120031 214 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm25369-201ENSMUST00000158848 132 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm17155-201ENSMUST00000165969 473 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm23633-201ENSMUST00000175293 119 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm11392-201ENSMUST00000181419 710 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm29815-201ENSMUST00000202418 178 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm45400-201ENSMUST00000211603 653 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.11□□□□□ -1.43
Col17a1Q07563 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col17a1Q07563 Gm22043-201ENSMUST00000082993 158 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms