Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Sox9Q04887 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Sox9Q04887 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm14670-201ENSMUST00000117327 337 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm15025-201ENSMUST00000118434 418 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm13804-201ENSMUST00000119552 172 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm12095-201ENSMUST00000121962 816 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm22563-201ENSMUST00000157333 269 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm2389-201ENSMUST00000160487 189 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm37523-201ENSMUST00000194901 412 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm9317-201ENSMUST00000197055 862 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm17956-201ENSMUST00000199931 838 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm18482-201ENSMUST00000202405 760 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm45499-201ENSMUST00000211656 280 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 AC117202.2-201ENSMUST00000226491 1101 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox9Q04887 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Sox9Q04887 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Sox9Q04887 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.89□□□□□ -1.63
Sox9Q04887 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Sox9Q04887 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Sox9Q04887 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Sox9Q04887 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sox9Q04887 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sox9Q04887 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Gm11698-201ENSMUST00000117948 455 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm22986-201ENSMUST00000122753 130 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.88□□□□□ -1.63
Sox9Q04887 Gm26092-201ENSMUST00000179798 97 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm21171-201ENSMUST00000180048 673 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.88□□□□□ -1.63
Sox9Q04887 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Gm37889-201ENSMUST00000194174 251 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm37495-201ENSMUST00000194590 264 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm43652-201ENSMUST00000196219 675 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm43440-201ENSMUST00000201957 729 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm7726-201ENSMUST00000206241 231 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm19140-201ENSMUST00000209790 421 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm22229-201ENSMUST00000082987 108 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Gm25008-201ENSMUST00000083809 81 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Olfr203-201ENSMUST00000089305 924 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.88□□□□□ -1.63
Sox9Q04887 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sox9Q04887 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Sox9Q04887 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox9Q04887 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox9Q04887 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox9Q04887 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox9Q04887 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox9Q04887 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox9Q04887 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms