Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm28957-201ENSMUST00000190174 373 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm8939-201ENSMUST00000192577 964 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.46□□□□□ -1.54
Col6a1Q04857 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a1Q04857 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a1Q04857 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Mecom-201ENSMUST00000061088 348 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm23406-201ENSMUST00000082537 122 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm25853-201ENSMUST00000082793 132 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Mir20a-201ENSMUST00000083508 107 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.46□□□□□ -1.54
Col6a1Q04857 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a1Q04857 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Col6a1Q04857 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a1Q04857 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm22758-201ENSMUST00000102275 96 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm14428-201ENSMUST00000120408 822 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm25339-201ENSMUST00000157458 232 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm24745-201ENSMUST00000157840 85 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm22383-201ENSMUST00000158188 327 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm23191-201ENSMUST00000179147 107 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm26746-201ENSMUST00000181722 487 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm28257-201ENSMUST00000185244 463 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm4557-201ENSMUST00000185826 907 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm4526-201ENSMUST00000186039 920 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm8708-201ENSMUST00000188500 906 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a1Q04857 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm22897-201ENSMUST00000197860 128 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm17956-201ENSMUST00000199931 838 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm43914-201ENSMUST00000203592 594 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a1Q04857 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm23928-201ENSMUST00000082469 145 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm22508-201ENSMUST00000082772 110 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Olfr203-201ENSMUST00000089305 924 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.45□□□□□ -1.54
Col6a1Q04857 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Col6a1Q04857 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Mir761-201ENSMUST00000103245 76 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm23273-201ENSMUST00000104058 135 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm24235-201ENSMUST00000104319 129 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm23837-201ENSMUST00000122656 286 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm5777-201ENSMUST00000177265 448 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Mir6413-201ENSMUST00000184049 108 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm37603-201ENSMUST00000192368 219 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.44□□□□□ -1.54
Col6a1Q04857 Gm7675-201ENSMUST00000208828 686 ntBASIC5.44□□□□□ -1.54
Col6a1Q04857 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms