Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.32□□□□□ -1.72
Col8a1Q00780 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm8249-201ENSMUST00000219225 465 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm7093-201ENSMUST00000223004 581 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm13378-201ENSMUST00000117483 336 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm14831-201ENSMUST00000120253 409 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm11679-201ENSMUST00000121830 779 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm24909-201ENSMUST00000157290 280 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm26352-201ENSMUST00000158223 125 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm25362-201ENSMUST00000158854 105 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm22326-201ENSMUST00000158897 351 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm16125-201ENSMUST00000159003 339 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm4842-201ENSMUST00000183237 835 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Mir7047-201ENSMUST00000184595 64 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Mir7227-201ENSMUST00000200408 59 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm44475-201ENSMUST00000204041 424 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm45146-201ENSMUST00000207108 221 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm8672-201ENSMUST00000221200 332 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm7040-201ENSMUST00000223271 443 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm22997-201ENSMUST00000082845 107 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm24316-201ENSMUST00000083041 107 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Col8a1Q00780 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.31□□□□□ -1.72
Col8a1Q00780 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms