Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm18719-201ENSMUST00000196696 1413 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm24096-201ENSMUST00000103905 110 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm15074-201ENSMUST00000117603 936 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm12739-201ENSMUST00000119769 382 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm7071-201ENSMUST00000120458 462 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm6265-201ENSMUST00000149263 231 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm24914-201ENSMUST00000157285 313 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm24787-201ENSMUST00000157380 123 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm24720-201ENSMUST00000157518 166 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm25373-201ENSMUST00000158156 115 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm23380-201ENSMUST00000158448 103 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm28877-201ENSMUST00000191349 604 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm18445-201ENSMUST00000195502 774 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm6842-201ENSMUST00000211361 390 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm22864-201ENSMUST00000083950 130 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.75□□□□□ -1.97
Nkx3-1P97436 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nkx3-1P97436 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm15466-201ENSMUST00000122299 333 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm23234-201ENSMUST00000157304 134 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm24061-201ENSMUST00000157489 120 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21842-201ENSMUST00000177552 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21626-201ENSMUST00000177791 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21562-201ENSMUST00000177888 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21539-201ENSMUST00000177925 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm23402-201ENSMUST00000178130 107 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17522-201ENSMUST00000178144 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21599-201ENSMUST00000178249 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm7094-201ENSMUST00000178379 366 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21914-201ENSMUST00000178452 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21723-201ENSMUST00000178692 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21916-201ENSMUST00000178771 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21801-201ENSMUST00000178865 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21633-201ENSMUST00000178941 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17412-201ENSMUST00000179261 468 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21821-201ENSMUST00000179646 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21588-201ENSMUST00000180074 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21780-201ENSMUST00000180128 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21572-201ENSMUST00000180134 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm21529-201ENSMUST00000180175 498 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm18486-201ENSMUST00000184040 298 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Mir6917-201ENSMUST00000184111 61 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm27648-201ENSMUST00000184315 107 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm29370-202ENSMUST00000187476 499 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm42850-201ENSMUST00000202094 201 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Olfr844-201ENSMUST00000054106 930 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Gm22245-201ENSMUST00000082479 103 ntBASIC2.74□□□□□ -1.97
Nkx3-1P97436 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Nkx3-1P97436 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms